RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 GNSP15586 552 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 B4GALNT1Q00973 533 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 BNC1Q01954 994 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 MGAT5Q09328 741 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 CTBP1Q13363 440 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 CCDC6Q16204 474 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 LDLRAP1Q5SW96 308 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 TEDDM1Q5T9Z0 273 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 ZNF470Q6ECI4 717 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 MRNIPQ6NTE8 343 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 TRMT10CQ7L0Y3 403 aaKnown RBP17.23■□□□□ 0.35
TUBB3-211ENST00000556536 ADGRG6Q86SQ4 1221 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 IQCHQ86VS3 1027 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 SPATS2Q86XZ4 545 aaKnown RBP17.23■□□□□ 0.35
TUBB3-211ENST00000556536 FAM174AQ8TBP5 190 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 FBF1Q8TES7 1133 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 BOCQ9BWV1 1114 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 ARRDC1-AS1Q9H2J1 176 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 EPB41L4BQ9H329 900 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 CAAP1Q9H8G2 361 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 ZDHHC3Q9NYG2 299 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 SUSD2Q9UGT4 822 aa17.23■□□□□ 0.35
TUBB3-211ENST00000556536 PNMA8BQ9ULN7 279 aaPredicted RBP17.23■□□□□ 0.35
TUBB3-211ENST00000556536 CXorf49A8MYA2 514 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-211ENST00000556536 PRR5-ARHGAP8B1AHC4 643 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 PATE3B3GLJ2 98 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 RIPK2O43353 540 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 OR1I1O60431 355 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 SPAG6O75602 509 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 CEACAM5P06731 702 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 SLC1A2P43004 574 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 THOP1P52888 689 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 NXPH1P58417 271 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 FZD2Q14332 565 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 TYSND1Q2T9J0 566 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 ZNF789Q5FWF6 425 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 LAIR1Q6GTX8 287 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 EMBQ6PCB8 327 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 CYS1Q717R9 158 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 SDCCAG8Q86SQ7 713 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-211ENST00000556536 CILP2Q8IUL8 1156 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 CNTN4Q8IWV2 1026 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 UHMK1Q8TAS1 419 aaKnown RBP17.22■□□□□ 0.35
TUBB3-211ENST00000556536 CAVIN3Q969G5 261 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.22■□□□□ 0.35
TUBB3-211ENST00000556536 COPS8Q99627 209 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 FAM167BQ9BTA0 163 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 OR2AG1Q9H205 316 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 SMOC1Q9H4F8 434 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 TRIM39Q9HCM9 518 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 FGF22Q9HCT0 170 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 FSCN3Q9NQT6 498 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 ATXN10Q9UBB4 475 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 DOCK9Q9BZ29 2069 aa17.22■□□□□ 0.35
TUBB3-211ENST00000556536 THADAQ6YHU6 1953 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 IGLV3-16A0A075B6K0 115 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 SPTY2D1-AS1A0A0U1RR47 76 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 FAM159BA6NKW6 160 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 ASMTLO95671 621 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 S1PR4O95977 384 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 FUCA1P04066 466 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 OGNP20774 298 aaKnown RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 PMLP29590 882 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 AKT1P31749 480 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 STX2P32856 288 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 HOXD12P35452 270 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 MPLP40238 635 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 C21orf59P57076 290 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 MPP1Q00013 466 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 OVGP1Q12889 678 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 TMEM115Q12893 351 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 EFTUD2Q15029 972 aaKnown RBP eCLIP17.21■□□□□ 0.351e-10■■■■■ 39.2
TUBB3-211ENST00000556536 TEAD4Q15561 434 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 UAP1Q16222 522 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 AARS2Q5JTZ9 985 aaKnown RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 LYPLAL1Q5VWZ2 237 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 ENPP7Q6UWV6 458 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 CERS6Q6ZMG9 384 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 MACC1Q6ZN28 852 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 MARK2Q7KZI7 788 aaKnown RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 RASGEF1AQ8N9B8 481 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 C2CD4AQ8NCU7 369 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 OR1E3Q8WZA6 343 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 WDR92Q96MX6 357 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 FUT8Q9BYC5 575 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 MRPL40Q9NQ50 206 aaKnown RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 FBXO6Q9NRD1 293 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 RABGEF1Q9UJ41 708 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 FBXO5Q9UKT4 447 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 SLC17A4Q9Y2C5 497 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 ANKRD6Q9Y2G4 727 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 PCDHGA5Q9Y5G8 931 aa17.21■□□□□ 0.35
TUBB3-211ENST00000556536 PCYT1BQ9Y5K3 369 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-211ENST00000556536 ZNF106Q9H2Y7 1883 aaKnown RBP17.2■□□□□ 0.34
TUBB3-211ENST00000556536 CFIP05156 583 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 ZNF8P17098 575 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-211ENST00000556536 MSH3P20585 1137 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 HTR1BP28222 390 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms