RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TTC9BQ8N6N2 239 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GIPC3Q8TF64 312 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 MTBPQ96DY7 904 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PRR11Q96HE9 360 aaPredicted RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TEKT5Q96M29 485 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 NUDCD1Q96RS6 583 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SLC29A1Q99808 456 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ZNF395Q9H8N7 513 aaPredicted RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TBC1D13Q9NVG8 400 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 NMRK1Q9NWW6 199 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PCDH10Q9P2E7 1040 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 KLHL8Q9P2G9 620 aaPredicted RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SRRDQ9UH36 339 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PCDHB8Q9UN66 801 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ANAPC1Q9H1A4 1944 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 C5orf42Q9H799 3197 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 A0A1W2PQ45 241 aaPredicted RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 A0A1W2PQY0 241 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 C2orf71A6NGG8 1288 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ZBBXA8MT70 800 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TMEM189-UBE2V1I3L0A0 370 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 AP3D1O14617 1153 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ANGPT2O15123 496 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PAGE1O75459 146 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GPC4O75487 556 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 RHOBTB1O94844 696 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ERVK-10P10266 1014 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PRKAR1AP10644 381 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PABPC1P11940 636 aaKnown RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ITGA2P17301 1181 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ACSL1P33121 698 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CRHR1P34998 444 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 RGS19P49795 217 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 S100A12P80511 92 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 OCRLQ01968 901 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 LSAMPQ13449 338 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 RCN2Q14257 317 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CCDC6Q16204 474 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ZNF674Q2M3X9 581 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CNPY1Q3B7I2 92 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SLC39A12Q504Y0 691 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 GRTP1Q5TC63 336 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 PXDC1Q5TGL8 231 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SDHAF4Q5VUM1 108 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SLC24A5Q71RS6 500 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TAS2R42Q7RTR8 314 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 METTL23Q86XA0 190 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 LZTR1Q8N653 840 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 OR56B2PQ8NGI1 322 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 MOSPD2Q8NHP6 518 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 HEXDCQ8WVB3 486 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CAPSLQ8WWF8 208 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TANKQ92844 425 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 APBB2Q92870 758 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 SLC7A6OSQ96CW6 309 aaPredicted RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 MFSD3Q96ES6 412 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CERS2Q96G23 380 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ZNF778Q96MU6 729 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 LRRC37BQ96QE4 947 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CDK5RAP1Q96SZ6 601 aaKnown RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ZSCAN5AQ9BUG6 496 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 TSSK1BQ9BXA7 367 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 ZNF717Q9BY31 904 aaPredicted RBP5.07□□□□□ -1.6
TMEM260-210ENST00000556422 COG4Q9H9E3 785 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 NDUFA13Q9P0J0 144 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 HCSTQ9UBK5 93 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 CYB5R1Q9UHQ9 305 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 COL4A6Q14031 1691 aa5.07□□□□□ -1.6
TMEM260-210ENST00000556422 RGSL1A5PLK6 1076 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 A8MUI8 341 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 KCNU1A8MYU2 1149 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 TPP1O14773 563 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 GNB5O14775 395 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 MAFKO60675 156 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 SNNO75324 88 aaPredicted RBP5.06□□□□□ -1.6
TMEM260-210ENST00000556422 VNN2O95498 520 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 EOMESO95936 686 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 NQO1P15559 274 aaKnown RBP5.06□□□□□ -1.6
TMEM260-210ENST00000556422 MAGEA12P43365 314 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 CSRP3P50461 194 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 LBX1P52954 281 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 BST1Q10588 318 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 HERC3Q15034 1050 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 TCTN1Q2MV58 587 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 CERCAMQ5T4B2 595 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 OR7E24Q6IFN5 339 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 ANO7Q6IWH7 933 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 HMBOX1Q6NT76 420 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 CLNKQ7Z7G1 428 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 RNF180Q86T96 592 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 ZNF683Q8IZ20 524 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 CRIPAKQ8N1N5 446 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 EFHBQ8N7U6 833 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 ZNF398Q8TD17 642 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 ISL2Q96A47 359 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 TMEM68Q96MH6 324 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 ASB16Q96NS5 453 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 AGAP2Q99490 1192 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 ACPTQ9BZG2 426 aa5.06□□□□□ -1.6
TMEM260-210ENST00000556422 KLHL25Q9H0H3 589 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms