RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 UNC13CQ8NB66 2214 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 GLYATL1P3A0A0U1RQE8 302 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 C2orf81A6NN90 581 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 NTN3O00634 580 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 GAPDHSO14556 408 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 CHUKO15111 745 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 STX7O15400 261 aaKnown RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 PSMD3O43242 534 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 GRID2O43424 1007 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 BUD23O43709 281 aaKnown RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 VEGFDO43915 354 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 CSO75390 466 aaKnown RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 AP2A1O95782 977 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ACP5P13686 325 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ZNF8P17098 575 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 LPOP22079 712 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 MAZP56270 477 aaKnown RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 PDE1BQ01064 536 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ITGA9Q13797 1035 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 SPIDRQ14159 915 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 SPARCL1Q14515 664 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 RTP5Q14D33 572 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 SIX1Q15475 284 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ATP13A5Q4VNC0 1218 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 DRICH1Q6PGQ1 229 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 FAM151BQ6UXP7 276 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 CHST15Q7LFX5 561 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ZNF438Q7Z4V0 828 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 SPRED1Q7Z699 444 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ADGRG6Q86SQ4 1221 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 PROSER1Q86XN7 944 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 CCNJLQ8IV13 435 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 NAGSQ8N159 534 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 MDM1Q8TC05 714 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 BRSK1Q8TDC3 778 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 MAIP1Q8WWC4 291 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 GRAMD1AQ96CP6 724 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 C19orf43Q9BQ61 176 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ZCCHC2Q9C0B9 1178 aaKnown RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 KCNF1Q9H3M0 494 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 SYNDIG1Q9H7V2 258 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 SMOXQ9NWM0 555 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 TMPRSS11EQ9UL52 423 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ZMIZ1Q9ULJ6 1067 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ZNF148Q9UQR1 794 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ZKSCAN5Q9Y2L8 839 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 PRKAB1Q9Y478 270 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 PCDHB1Q9Y5F3 818 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 ARL5AQ9Y689 179 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 RNF215Q9Y6U7 377 aa11.4□□□□□ -0.58
SLIRP-205ENST00000556310 DSPP15924 2871 aaKnown RBP11.4□□□□□ -0.58
SLIRP-205ENST00000556310 KIF26BQ2KJY2 2108 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 ERI2A8K979 691 aaKnown RBP11.39□□□□□ -0.59
SLIRP-205ENST00000556310 D6RAR5 112 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 ZSCAN12O43309 604 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 MTX2O75431 263 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 PRAMEF1O95521 474 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 ECEL1O95672 775 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 CRTAMO95727 393 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 IFNB1P01574 187 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 FGGP02679 453 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 RPLP0P05388 317 aaKnown RBP11.39□□□□□ -0.59
SLIRP-205ENST00000556310 ACTN2P35609 894 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 FDFT1P37268 417 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 CLCNKAP51800 687 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 ZNF140P52738 457 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-205ENST00000556310 PDX1P52945 283 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 MSLNQ13421 630 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-205ENST00000556310 NR1D2Q14995 579 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 CHRNA6Q15825 494 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 CCNG2Q16589 344 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 ISXQ2M1V0 245 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 KHDC1Q4VXA5 237 aaKnown RBP11.39□□□□□ -0.59
SLIRP-205ENST00000556310 ZNF648Q5T619 568 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-205ENST00000556310 BRICD5Q6PL45 260 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 CRTC3Q6UUV7 619 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 LRRTM4Q86VH4 590 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 RETREG3Q86VR2 466 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 ARL14Q8N4G2 192 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 DDHD1Q8NEL9 900 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 OR4K2Q8NGD2 314 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 GDAP1Q8TB36 358 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 PATE1Q8WXA2 126 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 PDLIM2Q96JY6 352 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 GFM1Q96RP9 751 aaKnown RBP11.39□□□□□ -0.59
SLIRP-205ENST00000556310 TIMM29Q9BSF4 260 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 LRRN3Q9H3W5 708 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 LRIT1Q9P2V4 623 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 KCNK6Q9Y257 313 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 JRKLQ9Y4A0 524 aa11.39□□□□□ -0.59
SLIRP-205ENST00000556310 A0A1W2PQM1 296 aa11.38□□□□□ -0.59
SLIRP-205ENST00000556310 A6NCN8 305 aa11.38□□□□□ -0.59
SLIRP-205ENST00000556310 RHPN2P1A8MT19 583 aa11.38□□□□□ -0.59
SLIRP-205ENST00000556310 CFAP99D6REC4 459 aa11.38□□□□□ -0.59
SLIRP-205ENST00000556310 KMOO15229 486 aa11.38□□□□□ -0.59
SLIRP-205ENST00000556310 CASC3O15234 703 aaKnown RBP11.38□□□□□ -0.59
SLIRP-205ENST00000556310 GPR39O43194 453 aa11.38□□□□□ -0.59
SLIRP-205ENST00000556310 LDB2O43679 373 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms