RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZNF354BQ96LW1 612 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 DSN1Q9H410 356 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 UPB1Q9UBR1 384 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 RIIAD1A6NNX1 92 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CBSLP0DN79 551 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 ANPEPP15144 967 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 ENDOUP21128 410 aaKnown RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 SDC2P34741 201 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CBSP35520 551 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 AVPR1BP47901 424 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 TRIM25Q14258 630 aaKnown RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 PDK3Q15120 406 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 TOMM20Q15388 145 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CPSF6Q16630 551 aaKnown RBP eCLIP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 PTPN20Q4JDL3 420 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 ESRP1Q6NXG1 681 aaKnown RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CHST9Q7L1S5 443 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 ANKS1BQ7Z6G8 1248 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 PQLC1Q8N2U9 271 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CERS5Q8N5B7 392 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 TRPV1Q8NER1 839 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 TNFRSF25Q93038 417 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 SAMD11Q96NU1 681 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 AARSD1Q9BTE6 412 aaKnown RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 SDCBP2Q9H190 292 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 RHBGQ9H310 441 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CRISPLD1Q9H336 500 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 PCDH12Q9NPG4 1184 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 ELOVL7A1L3X0 281 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CBX6O95503 412 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CYB5AP00167 134 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 GNAZP19086 355 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 SLC18A1P54219 525 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 HERC3Q15034 1050 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 ZCCHC23Q6ZST2 131 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 JAZF1Q86VZ6 243 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 PJA1Q8NG27 643 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 OR2T34Q8NGX1 318 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 OR2T3Q8NH03 318 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 SNIP1Q8TAD8 396 aaKnown RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CPNE2Q96FN4 548 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 PRRG4Q9BZD6 226 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 UNC93B1Q9H1C4 597 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 MAFFQ9ULX9 164 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 COG5Q9UP83 839 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 DMTF1Q9Y222 760 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 MAP2P11137 1827 aaKnown RBP10.65□□□□□ -0.71
ACTN1-216ENST00000556083 SERPINA3P01011 423 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 PSMA1P25786 263 aaKnown RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 POLR2JP52435 117 aaKnown RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 SLC5A3P53794 718 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 TSTD2Q5T7W7 516 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 C16orf46Q6P387 395 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 PTCHD4Q6ZW05 846 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 SNX20Q7Z614 316 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 PLD5Q8N7P1 536 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 ZNF563Q8TA94 476 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 HCAR2Q8TDS4 363 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 ZBED6CLQ96FA7 236 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 SLC4A5Q9BY07 1137 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 YTHDF1Q9BYJ9 559 aaKnown RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 OSBPL2Q9H1P3 480 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 PDZD7Q9H5P4 517 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 TFB2MQ9H5Q4 396 aaKnown RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 COPS7AQ9UBW8 275 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 ABHD14A-ACY1A0A1B0GW23 586 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 EIF4E1BA6NMX2 242 aaKnown RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 G3V2T6 193 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 FPGTO14772 594 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 TSPAN1O60635 241 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 CD2P06729 351 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 DRD4P21917 467 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 MAPK10P53779 464 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 ADARP55265 1226 aaKnown RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 DMPKQ09013 629 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 GRSF1Q12849 480 aaKnown RBP eCLIP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 IRF5Q13568 498 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 GJC2Q5T442 439 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 FAAH2Q6GMR7 532 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 ADGRD2Q7Z7M1 963 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 PIGXQ8TBF5 258 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 LGMNQ99538 433 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 KCNS3Q9BQ31 491 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 RERGLQ9H628 205 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 ARMCX1Q9P291 453 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 PCDHGB5Q9Y5G0 923 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 ABCC6O95255 1503 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 A0A0J9YYE9 177 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 ZNF487B1APH4 448 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 AHCYL1O43865 530 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 FUT2Q10981 343 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 SF1Q15637 639 aaKnown RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 RAB30Q15771 203 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 C9orf43Q8TAL5 461 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 SEMA4DQ92854 862 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 COPS5Q92905 334 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 BORCS5Q969J3 196 aa10.64□□□□□ -0.71
ACTN1-216ENST00000556083 EFHD2Q96C19 240 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-216ENST00000556083 OTUB2Q96DC9 234 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms