RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 MAP10Q9P2G4 905 aa18.69■□□□□ 0.58
SUPT16H-203ENST00000555752 ERRFI1Q9UJM3 462 aaPredicted RBP18.69■□□□□ 0.58
SUPT16H-203ENST00000555752 ADGRG1Q9Y653 693 aa18.69■□□□□ 0.58
SUPT16H-203ENST00000555752 OR5K4A6NMS3 321 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 C21orf140B9A014 251 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 H3BRJ5 948 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 TOX3O15405 576 aaPredicted RBP18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 NUAK1O60285 661 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 RNF8O76064 485 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 PRLP01236 227 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 VIPP01282 170 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 XRCC1P18887 633 aaPredicted RBP18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 UBE2HP62256 183 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 DSC2Q02487 901 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 HENMT1Q5T8I9 393 aaKnown RBP18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 CDKAL1Q5VV42 579 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 CRTC3Q6UUV7 619 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 POLNQ7Z5Q5 900 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 NDUFAF2Q8N183 169 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 NSMCE1Q8WV22 266 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 KLHL6Q8WZ60 621 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 CSPG4P5Q96PW8 444 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 ING2Q9H160 280 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 OR2AG1Q9H205 316 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 CLSTN2Q9H4D0 955 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 RMI1Q9H9A7 625 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 UCK1Q9HA47 277 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 ACSS2Q9NR19 701 aa18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 PCDHGA9Q9Y5G4 932 aaKnown RBP18.68■□□□□ 0.58
SUPT16H-203ENST00000555752 SPINT3P49223 89 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 CDH6P55285 790 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 LAMB3Q13751 1172 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 PAPD7Q5XG87 772 aaKnown RBP18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 JMJD6Q6NYC1 403 aaPredicted RBP18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 PRSS42Q7Z5A4 293 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 PSTKQ8IV42 348 aaKnown RBP18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 TRIM48Q8IWZ4 208 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 TEX26Q8N6G2 289 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 AOPEPQ8N6M6 819 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 LPCAT1Q8NF37 534 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 NEK11Q8NG66 645 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 THAP4Q8WY91 577 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 HSPH1Q92598 858 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 TDRD1Q9BXT4 1180 aaKnown RBP18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 CARD9Q9H257 536 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 FAM83DQ9H4H8 585 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 SRPK3Q9UPE1 567 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 DNAJC16Q9Y2G8 782 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 DOPEY1Q5JWR5 2465 aa18.67■□□□□ 0.58
SUPT16H-203ENST00000555752 C1orf232A0A0U1RR37 186 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 WIPF3A6NGB9 483 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 KRT86O43790 486 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 LDLRP01130 860 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 MT-ND3P03897 115 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 BRAFP15056 766 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 FOLR1P15328 257 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 PTPN4P29074 926 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 PTGIRP43119 386 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 CAPZBP47756 277 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 DPYSL2Q16555 572 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 TXNRD3NBQ6F5E7 133 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 IRGCQ6NXR0 463 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 CERS6Q6ZMG9 384 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 SRRM1Q8IYB3 904 aaKnown RBP18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 AVL9Q8NBF6 648 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 C19orf60Q96EN9 201 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 SYT11Q9BT88 431 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 CSMD1Q96PZ7 3565 aa18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 PRRC2CQ9Y520 2896 aaKnown RBP18.66■□□□□ 0.58
SUPT16H-203ENST00000555752 ABCA12Q86UK0 2595 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 IGHV5-51A0A0C4DH38 117 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 OR52A4PA6NMU1 304 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 PDZK1P1A8MUH7 402 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 NELFEP18615 380 aaKnown RBP18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 RPL10P27635 214 aaKnown RBP18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 TNFRSF8P28908 595 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 ARL4AP40617 200 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 CLCNKAP51800 687 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 ZNF135P52742 658 aaPredicted RBP18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 TUBB3Q13509 450 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 GPR18Q14330 331 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 TDRD12Q587J7 1177 aaKnown RBP18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 TICAM1Q8IUC6 712 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 LRRN4Q8WUT4 740 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 POLR1EQ9GZS1 481 aaKnown RBP18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 TRIM10Q9UDY6 481 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 TTLL3Q9Y4R7 772 aa18.65■□□□□ 0.58
SUPT16H-203ENST00000555752 POU3F2P20265 443 aaPredicted RBP18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 IL4RP24394 825 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 DRG2P55039 364 aaKnown RBP18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 NIPAL4Q0D2K0 466 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 CHRNA6Q15825 494 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 INSCQ1MX18 579 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 FAM69BQ5VUD6 431 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 ALS2CLQ60I27 953 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 SLC6A19Q695T7 634 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 IRF2BP2Q7Z5L9 587 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 ADGRG6Q86SQ4 1221 aa18.64■□□□□ 0.57
SUPT16H-203ENST00000555752 SYVN1Q86TM6 617 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms