RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PGM1P36871 562 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 KIR2DS3Q14952 304 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 BRD3Q15059 726 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 ALG11Q2TAA5 492 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 PLXDC2Q6UX71 529 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 GPR180Q86V85 440 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 CPOQ8IVL8 374 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 LMNTD2Q8IXW0 634 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 ZNRF4Q8WWF5 429 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 KLHL15Q96M94 604 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 AGAP3Q96P47 875 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 MPHOSPH6Q99547 160 aaKnown RBP2.68□□□□□ -1.98
SRP54-207ENST00000555535 EIF2AK1Q9BQI3 630 aaKnown RBP2.68□□□□□ -1.98
SRP54-207ENST00000555535 H2AFJQ9BTM1 129 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 IFIH1Q9BYX4 1025 aaKnown RBP2.68□□□□□ -1.98
SRP54-207ENST00000555535 LRMDAQ9H2I8 198 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 KLHL9Q9P2J3 617 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 CNOT7Q9UIV1 285 aaKnown RBP2.68□□□□□ -1.98
SRP54-207ENST00000555535 A6NL46 340 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 FAM90A26D6RGX4 464 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 SNAP23O00161 211 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 SEC31AO94979 1220 aaKnown RBP2.67□□□□□ -1.98
SRP54-207ENST00000555535 ZNF23P17027 643 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 MSH3P20585 1137 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 TRAPPC10P48553 1259 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 GNAQP50148 359 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 MBTD1Q05BQ5 628 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 SLC9B1Q4ZJI4 515 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 KRTCAP3Q53RY4 240 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 DCST1Q5T197 706 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 Q6ZR54 194 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 ENAHQ8N8S7 591 aaPredicted RBP2.67□□□□□ -1.98
SRP54-207ENST00000555535 ZBTB10Q96DT7 871 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 ABHD8Q96I13 439 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 ACOX2Q99424 681 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 PSD2Q9BQI7 771 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 EXOGQ9Y2C4 368 aaKnown RBP2.67□□□□□ -1.98
SRP54-207ENST00000555535 JRKLQ9Y4A0 524 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 PCDHGB3Q9Y5G1 929 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 UTYO14607 1347 aa2.67□□□□□ -1.98
SRP54-207ENST00000555535 PCNX3Q9H6A9 2034 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 IGLV3-10A0A075B6K4 115 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 ANKRD28O15084 1053 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 KCNN4O15554 427 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 SYNCRIPO60506 623 aaKnown RBP2.66□□□□□ -1.98
SRP54-207ENST00000555535 GUCY1B2O75343 617 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 NR3C1P04150 777 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 COX7A2P14406 83 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 UGT1A1P22309 533 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 GABRB2P47870 512 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 UBE3AQ05086 875 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.66□□□□□ -1.98
SRP54-207ENST00000555535 ACVR2BQ13705 512 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 FGFBP1Q14512 234 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 USP41Q3LFD5 358 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 KIAA1644Q3SXP7 199 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 PLEKHM3Q6ZWE6 761 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 Q75L30 129 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 LRRC8DQ7L1W4 858 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 ZNF584Q8IVC4 421 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 CCDC13Q8IYE1 715 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 SAMD3Q8N6K7 520 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 HERVK_113Q902F9 699 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 IGSF8Q969P0 613 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 PHF21AQ96BD5 680 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 RAD21L1Q9H4I0 556 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 TRPC7Q9HCX4 862 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 LTB4R2Q9NPC1 389 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 ASIC3Q9UHC3 531 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 PRAG1Q86YV5 1406 aa2.66□□□□□ -1.98
SRP54-207ENST00000555535 A0A1W2PQM1 296 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 TMEM178BH3BS89 294 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 ZFAND5O76080 213 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 NADKO95544 446 aaPredicted RBP2.65□□□□□ -1.99
SRP54-207ENST00000555535 IGHV4-38-2P0DP08 117 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 CDAP32320 146 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 PSMC2P35998 433 aaKnown RBP2.65□□□□□ -1.99
SRP54-207ENST00000555535 GGT5P36269 586 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 UBA7P41226 1012 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 NR2C2P49116 596 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 DLK1P80370 383 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 FFAR4Q5NUL3 377 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 C6orf141Q5SZD1 244 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 ADAMTSL4-AS1Q5T5F5 129 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 MFSD6Q6ZSS7 791 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 DPPA4Q7L190 304 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 CCT6BQ92526 530 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 C18orf12Q96KH6 178 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 PCGF1Q9BSM1 259 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 ZBTB20Q9HC78 741 aaPredicted RBP2.65□□□□□ -1.99
SRP54-207ENST00000555535 RIC8AQ9NPQ8 531 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 DNAJB4Q9UDY4 337 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 FLT1P17948 1338 aa2.65□□□□□ -1.99
SRP54-207ENST00000555535 A0A0G2JNG1 304 aa2.64□□□□□ -1.99
SRP54-207ENST00000555535 USP17L23D6RBM5 183 aa2.64□□□□□ -1.99
SRP54-207ENST00000555535 PDE9AO76083 593 aa2.64□□□□□ -1.99
SRP54-207ENST00000555535 IGKV3-15P01624 115 aa2.64□□□□□ -1.99
SRP54-207ENST00000555535 HOXB5P09067 269 aa2.64□□□□□ -1.99
SRP54-207ENST00000555535 ELF1P32519 619 aa2.64□□□□□ -1.99
SRP54-207ENST00000555535 DRAP1Q14919 205 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms