RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 NTN3O00634 580 aaPredicted RBP13.07□□□□□ -0.32
APEX1-208ENST00000554813 MTX2O75431 263 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 SRP72O76094 671 aaKnown RBP13.07□□□□□ -0.32
APEX1-208ENST00000554813 PRAMEF1O95521 474 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 CAPNS1P04632 268 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 RPLP0P05388 317 aaKnown RBP13.07□□□□□ -0.32
APEX1-208ENST00000554813 SLC2A4P14672 509 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 TPH1P17752 444 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 VCLP18206 1134 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 GPR3P46089 330 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 CLCNKAP51800 687 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 MAZP56270 477 aaKnown RBP13.07□□□□□ -0.32
APEX1-208ENST00000554813 PTPRCAPQ14761 206 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 RTP5Q14D33 572 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 CRTC3Q6UUV7 619 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 LRRTM4Q86VH4 590 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 CCNJLQ8IV13 435 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 NAGSQ8N159 534 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 DNAAF3Q8N9W5 541 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 DDHD1Q8NEL9 900 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 NAP1L3Q99457 506 aaPredicted RBP13.07□□□□□ -0.32
APEX1-208ENST00000554813 ASB8Q9H765 288 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 RAB6BQ9NRW1 208 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 KLC4Q9NSK0 619 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 TRMT1Q9NXH9 659 aaKnown RBP13.07□□□□□ -0.32
APEX1-208ENST00000554813 TMPRSS11EQ9UL52 423 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 ZMIZ1Q9ULJ6 1067 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 KCNK6Q9Y257 313 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 KCTD3Q9Y597 815 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 PCYT1BQ9Y5K3 369 aaPredicted RBP13.07□□□□□ -0.32
APEX1-208ENST00000554813 ASXL3Q9C0F0 2248 aa13.07□□□□□ -0.32
APEX1-208ENST00000554813 TRBV23OR9-2A0A075B6M9 112 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 OR5K4A6NMS3 321 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 GAPDHSO14556 408 aaPredicted RBP13.06□□□□□ -0.32
APEX1-208ENST00000554813 LDB2O43679 373 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 SNX2O60749 519 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 KCNJ13O60928 360 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 ETS1P14921 441 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 ZNF7P17097 686 aaPredicted RBP13.06□□□□□ -0.32
APEX1-208ENST00000554813 ALDH4A1P30038 563 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 ZNF140P52738 457 aaPredicted RBP13.06□□□□□ -0.32
APEX1-208ENST00000554813 CDH17Q12864 832 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 LAMB3Q13751 1172 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 INSCQ1MX18 579 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 KHDC1Q4VXA5 237 aaKnown RBP13.06□□□□□ -0.32
APEX1-208ENST00000554813 GPRC6AQ5T6X5 926 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 IYDQ6PHW0 289 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 PPP1R21Q6ZMI0 780 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 ZNF438Q7Z4V0 828 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 SPRED1Q7Z699 444 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 TRAPPC5Q8IUR0 188 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 LSMEM2Q8N112 164 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 SFRP1Q8N474 314 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 ZNF514Q96K75 400 aaPredicted RBP13.06□□□□□ -0.32
APEX1-208ENST00000554813 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 STN1Q9H668 368 aaKnown RBP13.06□□□□□ -0.32
APEX1-208ENST00000554813 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 TBC1D29Q9UFV1 150 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 FKBPLQ9UIM3 349 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 PCDHB1Q9Y5F3 818 aa13.06□□□□□ -0.32
APEX1-208ENST00000554813 DNMT3AQ9Y6K1 912 aaPredicted RBP13.06□□□□□ -0.32
APEX1-208ENST00000554813 ARHGEF17Q96PE2 2063 aaPredicted RBP13.05□□□□□ -0.32
APEX1-208ENST00000554813 KIR2DS5A0A0G2JLQ3 304 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 A0A0G2JNG1 304 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 A0A1W2PQM1 296 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 KIR2DS3K7RE56 304 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 PPM1DO15297 605 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 B4GAT1O43505 415 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 SUN1O94901 812 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 APRTP07741 180 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 RALBP11234 206 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 F3P13726 295 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 MSH3P20585 1137 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 ITGALP20701 1170 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 AKT1P31749 480 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 RPL22P35268 128 aaKnown RBP13.05□□□□□ -0.32
APEX1-208ENST00000554813 TMPRSS15P98073 1019 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 XIAPP98170 497 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 B4GALNT1Q00973 533 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 NFATC2Q13469 925 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 SEMA5AQ13591 1074 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 SEPT6Q14141 434 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 POU6F1Q14863 301 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 KIR2DS5Q14953 304 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 NR1D2Q14995 579 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 GPR33Q49SQ1 333 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 SLC9B2Q86UD5 537 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 PIM3Q86V86 326 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 PROSER1Q86XN7 944 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 ZNF547Q8IVP9 402 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 SLC35F6Q8N357 371 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 RASGEF1CQ8N431 466 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 RASGEF1AQ8N9B8 481 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 AVL9Q8NBF6 648 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 OR52K1Q8NGK4 314 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 OR13C4Q8NGS5 318 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 STYXQ8WUJ0 223 aa13.05□□□□□ -0.32
APEX1-208ENST00000554813 PATE1Q8WXA2 126 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms