RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 USP12O75317 370 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 AGTP01019 485 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 MAZP56270 477 aaKnown RBP12.92□□□□□ -0.34
SHMT2-211ENST00000554310 NR1D2Q14995 579 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 BRD3Q15059 726 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 RPS6KA1Q15418 735 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 RANBP10Q6VN20 620 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 CHST15Q7LFX5 561 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-211ENST00000554310 LSMEM2Q8N112 164 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 NAGSQ8N159 534 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 FAM71DQ8N9W8 422 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 OSBPL9Q96SU4 736 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 OR2AG1Q9H205 316 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 LRRN3Q9H3W5 708 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 BPIFA1Q9NP55 256 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 IL17CQ9P0M4 197 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 ATXN10Q9UBB4 475 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 RNF14Q9UBS8 474 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 ZNHIT2Q9UHR6 403 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 FEZ2Q9UHY8 353 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-211ENST00000554310 RAB21Q9UL25 225 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 RAXQ9Y2V3 346 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 PKP3Q9Y446 797 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 PLEKHM1Q9Y4G2 1056 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 ENTPD2Q9Y5L3 495 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 GLYATL1P3A0A0U1RQE8 302 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 TCRBV7S2A1N4TA0A589 114 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 C2orf81A6NN90 581 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 TMX2-CTNND1H3BSU7 103 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 CHUKO15111 745 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 GRID2O43424 1007 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ATP8B1O43520 1251 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 DXOO77932 396 aaKnown RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ECEL1O95672 775 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ACP5P13686 325 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 SLC2A4P14672 509 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ZNF8P17098 575 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ACTN2P35609 894 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 GPR3P46089 330 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 LSSP48449 732 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 GABREP78334 506 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 PDE1BQ01064 536 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 BIRC2Q13490 618 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ITGA9Q13797 1035 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 TAF1AQ15573 450 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 CLPPQ16740 277 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 PARP6Q2NL67 630 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 IGF2-ASQ6U949 168 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ADGRG6Q86SQ4 1221 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 SLC13A5Q86YT5 568 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 CREG2Q8IUH2 290 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ARL14Q8N4G2 192 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 SNIP1Q8TAD8 396 aaKnown RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 RTP4Q96DX8 246 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ATXN7L3BQ96GX2 97 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 LIN37Q96GY3 246 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 TMEM74Q96NL1 305 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 C19orf43Q9BQ61 176 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 TBL1YQ9BQ87 522 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 TMEM121Q9BTD3 319 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 TLR10Q9BXR5 811 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 PARD6BQ9BYG5 372 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ZCCHC2Q9C0B9 1178 aaKnown RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 ANKZF1Q9H8Y5 726 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 IL26Q9NPH9 171 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 SMOXQ9NWM0 555 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 PCYT1BQ9Y5K3 369 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-211ENST00000554310 KIF26BQ2KJY2 2108 aa12.91□□□□□ -0.34
SHMT2-211ENST00000554310 CCDC187A0A096LP49 1063 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 CCDC151A5D8V7 595 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 CES2O00748 559 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 STX7O15400 261 aaKnown RBP12.9□□□□□ -0.34
SHMT2-211ENST00000554310 CRTAMO95727 393 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 MPOP05164 745 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 LPOP22079 712 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-211ENST00000554310 CCKBRP32239 447 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 MLLT3P42568 568 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-211ENST00000554310 FASLGP48023 281 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 CLCNKAP51800 687 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 GDF10P55107 478 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 CCL7P80098 99 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 EIF3IQ13347 325 aaKnown RBP12.9□□□□□ -0.34
SHMT2-211ENST00000554310 TBC1D25Q3MII6 688 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 ATP13A5Q4VNC0 1218 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 C3orf38Q5JPI3 329 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 FAM151BQ6UXP7 276 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 LRRTM4Q86VH4 590 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 SFRP1Q8N474 314 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 Q8N9G6 341 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-211ENST00000554310 AVL9Q8NBF6 648 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 PATE1Q8WXA2 126 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 ATG4AQ8WYN0 398 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 ZNF578Q96N58 590 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-211ENST00000554310 APOL2Q9BQE5 337 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 TIMM29Q9BSF4 260 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 STRADBQ9C0K7 418 aa12.9□□□□□ -0.34
SHMT2-211ENST00000554310 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms