RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ERLEC1Q96DZ1 483 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 DCUN1D1Q96GG9 259 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 TSNARE1Q96NA8 513 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 PANX3Q96QZ0 392 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 SELENOSQ9BQE4 189 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 BTBD1Q9H0C5 482 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 SLC6A17Q9H1V8 727 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 FAM96AQ9H5X1 160 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 NKIRAS1Q9NYS0 192 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 KLHL42Q9P2K6 505 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 EBF1Q9UH73 591 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 DCDC2Q9UHG0 476 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 CD84Q9UIB8 345 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 TLK1Q9UKI8 766 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 TMPRSS11EQ9UL52 423 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 GRID1Q9ULK0 1009 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 CRYL1Q9Y2S2 319 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 ACOT9Q9Y305 439 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 SIT1Q9Y3P8 196 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 OAS3Q9Y6K5 1087 aaKnown RBP7.58□□□□□ -1.2
TDP1-209ENST00000554180 PLXNA2O75051 1894 aa7.58□□□□□ -1.2
TDP1-209ENST00000554180 TRIOO75962 3097 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 FOXO6A8MYZ6 492 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 GPR89AB7ZAQ6 455 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 E5RI56 91 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 GOLGA8RI6L899 631 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 LATO43561 262 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 RNGTTO60942 597 aaKnown RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 RHOBTB1O94844 696 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 SLC25A14O95258 325 aaPredicted RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 WISP3O95389 354 aaPredicted RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 APOA4P06727 396 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 F7P08709 466 aaPredicted RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 GSTM1P09488 218 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 OR56A5P0C7T3 313 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 GPR89BP0CG08 455 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 CREB1P16220 341 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 ZNF37AP17032 561 aaPredicted RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 MSH3P20585 1137 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 HOXA6P31267 233 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 FMO4P31512 558 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 AKT1P31749 480 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 TRIM23P36406 574 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 GPR1P46091 355 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 CCR3P51677 355 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 CDKN2DP55273 166 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 B4GALNT1Q00973 533 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 GSTM4Q03013 218 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 PDAP1Q13442 181 aaKnown RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 LRRC14Q15048 493 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 SEL1L3Q68CR1 1132 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 PTRHD1Q6GMV3 140 aaKnown RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 RAET1GQ6H3X3 334 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 ANO7Q6IWH7 933 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 PNCKQ6P2M8 343 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 MICALCLQ6ZW33 695 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 RAPH1Q70E73 1250 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D1Q86TI0 1168 aaPredicted RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 SLC41A1Q8IVJ1 513 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 CEP97Q8IW35 865 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 PGBD3Q8N328 593 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 ACVR1CQ8NER5 493 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 GDAP1Q8TB36 358 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 DENND1AQ8TEH3 1009 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 EDAQ92838 391 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 ZNF514Q96K75 400 aaPredicted RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 UBXN10Q96LJ8 280 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 LENG8Q96PV6 779 aaPredicted RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 NDNQ99608 321 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 KLF6Q99612 283 aaPredicted RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 OLFM1Q99784 485 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 TSSK1BQ9BXA7 367 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 SLC13A1Q9BZW2 595 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 PCED1AQ9H1Q7 454 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 VPS11Q9H270 941 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 EPHX3Q9H6B9 360 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 CAB39LQ9H9S4 337 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 SYTL2Q9HCH5 934 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 GPAMQ9HCL2 828 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 KCNK9Q9NPC2 374 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 CD320Q9NPF0 282 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 LATS2Q9NRM7 1088 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 TRMT6Q9UJA5 497 aaKnown RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 MID2Q9UJV3 735 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 ZFR2Q9UPR6 939 aaKnown RBP7.57□□□□□ -1.2
TDP1-209ENST00000554180 MED16Q9Y2X0 877 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 COQ6Q9Y2Z9 468 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 PLLPQ9Y342 182 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 BPTFQ12830 3046 aa7.57□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3DA0A087WVF3 549 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3IA0A087WXS9 549 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3EA0A087X179 549 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3KA0A087X1G2 549 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 CCDC163A0A0D9SF12 145 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 A0A1W2PQU0 124 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 KLHL33A6NCF5 533 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3FA6NER0 549 aaPredicted RBP7.56□□□□□ -1.2
TDP1-209ENST00000554180 TBC1D3LB9A6J9 549 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 K7ESM1 405 aa7.56□□□□□ -1.2
TDP1-209ENST00000554180 EIF3FO00303 357 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms