RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TMED2Q15363 201 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 FAM46CQ5VWP2 391 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 KIAA1324Q6UXG2 1013 aaKnown RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 STK40Q8N2I9 435 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 TTC9Q92623 222 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 MTBPQ96DY7 904 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 MRRFQ96E11 262 aaKnown RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 SCRN2Q96FV2 425 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF778Q96MU6 729 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 CPNE1Q99829 537 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 GPR174Q9BXC1 333 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 DYRK4Q9NR20 520 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 NLE1Q9NVX2 485 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 SENP1Q9P0U3 644 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 ARL5AQ9Y689 179 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 FLNCQ14315 2725 aa14.4□□□□□ -0.1
SHMT2-208ENST00000553868 ANKRD17O75179 2603 aaKnown RBP14.4□□□□□ -0.1
SHMT2-208ENST00000553868 BSNQ9UPA5 3926 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 BOD1L1Q8NFC6 3051 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 CCDC78A2IDD5 438 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 H3BQF6 201 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 KPNA3O00505 521 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 C1QAP02745 245 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 PRKCGP05129 697 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 SNRPAP09012 282 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 CTPS1P17812 591 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 KRT15P19012 456 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 OAS2P29728 719 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 NTSR1P30989 418 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 GP5P40197 560 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 CSNK1EP49674 416 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 CSE1LP55060 971 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 STARD3Q14849 445 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 KIF19Q2TAC6 998 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 HSP90AA5PQ58FG0 334 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 GRTP1Q5TC63 336 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 ZDHHC20Q5W0Z9 365 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 NEPROQ6NW34 567 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 AFTPHQ6ULP2 937 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 IL27RAQ6UWB1 636 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 KIAA0408Q6ZU52 694 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 TTC30BQ8N4P2 665 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 ZNF366Q8N895 744 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 OR6P1Q8NGX9 317 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 DCAKDQ8WVC6 231 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 SCG3Q8WXD2 468 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 ARL8AQ96BM9 186 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 TOE1Q96GM8 510 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 MRGPRX1Q96LB2 322 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 MCCC1Q96RQ3 725 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 ZFYVE1Q9HBF4 777 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 IARS2Q9NSE4 1012 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 SLC2A6Q9UGQ3 507 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 EIF2B4Q9UI10 523 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 NOVA2Q9UNW9 492 aaKnown RBP14.39□□□□□ -0.11
SHMT2-208ENST00000553868 SNX11Q9Y5W9 270 aa14.39□□□□□ -0.11
SHMT2-208ENST00000553868 C1orf232A0A0U1RR37 186 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 CXorf49A8MYA2 514 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-208ENST00000553868 PFDN6O15212 129 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 SLC4A1P02730 911 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ALPIP09923 528 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ZNF30P17039 623 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ITGB7P26010 798 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 GCAP28676 217 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 CD6P30203 668 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 SPRP35270 261 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-208ENST00000553868 HNF1BP35680 557 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 HMGCLP35914 325 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 GRK6P43250 576 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ARCN1P48444 511 aaKnown RBP14.38□□□□□ -0.11
SHMT2-208ENST00000553868 CCDC15Q0P6D6 951 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 DNAJC3Q13217 504 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ARHGEF7Q14155 803 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 SUZ12Q15022 739 aaKnown RBP14.38□□□□□ -0.11
SHMT2-208ENST00000553868 TTMPQ5BVD1 217 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 TEDDM1Q5T9Z0 273 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 HES3Q5TGS1 186 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 MRNIPQ6NTE8 343 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ERAP2Q6P179 960 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 LAYNQ6UX15 382 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 PACS1Q6VY07 963 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 LYSMD3Q7Z3D4 306 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 CNTN4Q8IWV2 1026 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ARFGAP2Q8N6H7 521 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 OTUD6BQ8N6M0 293 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 OR4K2Q8NGD2 314 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 OR13J1Q8NGT2 312 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 HDAC10Q969S8 669 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ZBTB9Q96C00 473 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 TLCD1Q96CP7 247 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 MED8Q96G25 268 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 DNAJC1Q96KC8 554 aaKnown RBP14.38□□□□□ -0.11
SHMT2-208ENST00000553868 NRSN2Q9GZP1 204 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 MTG2Q9H4K7 406 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 PRSS16Q9NQE7 514 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 SMYD2Q9NRG4 433 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 RAD18Q9NS91 495 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 EURLQ9NYK6 297 aa14.38□□□□□ -0.11
SHMT2-208ENST00000553868 ANKMY1Q9P2S6 941 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms