RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 LDB1Q86U70 411 aaPredicted RBP17.85■□□□□ 0.45
PSEN1-208ENST00000553719 DCP2Q8IU60 420 aaKnown RBP17.85■□□□□ 0.45
PSEN1-208ENST00000553719 DENND6AQ8IWF6 608 aa17.85■□□□□ 0.45
PSEN1-208ENST00000553719 KNL1Q8NG31 2342 aa17.85■□□□□ 0.45
PSEN1-208ENST00000553719 FAM167BQ9BTA0 163 aa17.85■□□□□ 0.45
PSEN1-208ENST00000553719 MCMBPQ9BTE3 642 aa17.85■□□□□ 0.45
PSEN1-208ENST00000553719 TRIM39Q9HCM9 518 aa17.85■□□□□ 0.45
PSEN1-208ENST00000553719 FGF22Q9HCT0 170 aa17.85■□□□□ 0.45
PSEN1-208ENST00000553719 ZDHHC3Q9NYG2 299 aa17.85■□□□□ 0.45
PSEN1-208ENST00000553719 SLC17A6Q9P2U8 582 aa17.85■□□□□ 0.45
PSEN1-208ENST00000553719 PROB1E7EW31 1015 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 CHUKO15111 745 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 RIPK2O43353 540 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 SGTAO43765 313 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 MTX2O75431 263 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 FUCA1P04066 466 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 RETP07949 1114 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 CTSKP43235 329 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 TTPAP49638 278 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 MGAT5Q09328 741 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 THOC5Q13769 683 aaKnown RBP17.84■□□□□ 0.45
PSEN1-208ENST00000553719 UAP1Q16222 522 aaPredicted RBP17.84■□□□□ 0.45
PSEN1-208ENST00000553719 DUOXA1Q1HG43 343 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 ZNF648Q5T619 568 aaPredicted RBP17.84■□□□□ 0.45
PSEN1-208ENST00000553719 LYPLAL1Q5VWZ2 237 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 MRNIPQ6NTE8 343 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 KIAA0408Q6ZU52 694 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 GALNT7Q86SF2 657 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 C2CD4AQ8NCU7 369 aaPredicted RBP17.84■□□□□ 0.45
PSEN1-208ENST00000553719 CEP76Q8TAP6 659 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 CALML6Q8TD86 181 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 LPGAT1Q92604 370 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.84■□□□□ 0.45
PSEN1-208ENST00000553719 WDR92Q96MX6 357 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 TCF12Q99081 682 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 COPS8Q99627 209 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 BOCQ9BWV1 1114 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 ARFGAP3Q9NP61 516 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 IARS2Q9NSE4 1012 aaKnown RBP17.84■□□□□ 0.45
PSEN1-208ENST00000553719 ATXN10Q9UBB4 475 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 RAB23Q9ULC3 237 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 HCN4Q9Y3Q4 1203 aa17.84■□□□□ 0.45
PSEN1-208ENST00000553719 PCYT1BQ9Y5K3 369 aaPredicted RBP17.84■□□□□ 0.45
PSEN1-208ENST00000553719 A0A1B0GVT2 93 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 CXorf49A8MYA2 514 aaPredicted RBP17.83■□□□□ 0.44
PSEN1-208ENST00000553719 PATE3B3GLJ2 98 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 GPR89AB7ZAQ6 455 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 TNFRSF10CO14798 259 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 VEGFDO43915 354 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 MAGEC1O60732 1142 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 DNAJC6O75061 913 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 ACSL3O95573 720 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 S1PR4O95977 384 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 GPR89BP0CG08 455 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 KELP23276 732 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 GABRB3P28472 473 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 STX2P32856 288 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 LEPRP48357 1165 aaKnown RBP17.83■□□□□ 0.44
PSEN1-208ENST00000553719 POLD2P49005 469 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 THOP1P52888 689 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 EIF2B5Q13144 721 aaKnown RBP17.83■□□□□ 0.44
PSEN1-208ENST00000553719 PTK2BQ14289 1009 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 TEAD4Q15561 434 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 TAS2R42Q7RTR8 314 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 MREGQ8N565 214 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 OR56A4Q8NGH8 313 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 FBF1Q8TES7 1133 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 PDXPQ96GD0 296 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 P2RY12Q9H244 342 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 ARRDC1-AS1Q9H2J1 176 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 ACSS3Q9H6R3 686 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 VPS37BQ9H9H4 285 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 RABGEF1Q9UJ41 708 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 FBXO5Q9UKT4 447 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 ANKRD6Q9Y2G4 727 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 TMEM98Q9Y2Y6 226 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 PSAT1Q9Y617 370 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 DGKBQ9Y6T7 804 aa17.83■□□□□ 0.44
PSEN1-208ENST00000553719 TMEM131Q92545 1883 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 NUAK1O60285 661 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 OR1I1O60431 355 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 IVLP07476 585 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 F7P08709 466 aaPredicted RBP17.82■□□□□ 0.44
PSEN1-208ENST00000553719 ZNF8P17098 575 aaPredicted RBP17.82■□□□□ 0.44
PSEN1-208ENST00000553719 RPS3P23396 243 aaKnown RBP eCLIP17.82■□□□□ 0.44
PSEN1-208ENST00000553719 HTR1BP28222 390 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 NSG1P42857 185 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 ADARP55265 1226 aaKnown RBP17.82■□□□□ 0.44
PSEN1-208ENST00000553719 MPP1Q00013 466 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 TMEM115Q12893 351 aaPredicted RBP17.82■□□□□ 0.44
PSEN1-208ENST00000553719 CTBP1Q13363 440 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 ALG11Q2TAA5 492 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 KIF19Q2TAC6 998 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 KBTBD12Q3ZCT8 623 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 ZNF789Q5FWF6 425 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 RNF187Q5TA31 235 aaPredicted RBP17.82■□□□□ 0.44
PSEN1-208ENST00000553719 MARK2Q7KZI7 788 aaKnown RBP17.82■□□□□ 0.44
PSEN1-208ENST00000553719 PARGQ86W56 976 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 RBFAQ8N0V3 343 aa17.82■□□□□ 0.44
PSEN1-208ENST00000553719 RASGEF1AQ8N9B8 481 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms