RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ARRDC3Q96B67 414 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 APOLD1Q96LR9 279 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 PKMYT1Q99640 499 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 STRADBQ9C0K7 418 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 BHMT2Q9H2M3 363 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 MRPL46Q9H2W6 279 aaKnown RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 GJB4Q9NTQ9 266 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 LMBRD1Q9NUN5 540 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 FBXL12Q9NXK8 326 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 NLGN3Q9NZ94 848 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 SUN2Q9UH99 717 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 CACNA1DQ01668 2161 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 PLXND1Q9Y4D7 1925 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 CELSR2Q9HCU4 2923 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 RP1L1Q8IWN7 2480 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 CPED1A4D0V7 1026 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 E7ENX8 843 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 H3BUI4 141 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 FFAR2O15552 330 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 NEMFO60524 1076 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 CLDN1O95832 211 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 TGM2P21980 687 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 SCP2P22307 547 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 CD82P27701 267 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 CDC25AP30304 524 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 CHKAP35790 457 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 UQCRFS1P47985 274 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 PTH2RP49190 550 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 LIG4P49917 911 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF135P52742 658 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 MLLT10P55197 1068 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 MC2RQ01718 297 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 POU5F1Q01860 360 aaKnown RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 TAP2Q03519 686 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF177Q13360 481 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 DHX8Q14562 1220 aaKnown RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 NPY5RQ15761 445 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 LACTB2Q53H82 288 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 SNX30Q5VWJ9 437 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 HAUS3Q68CZ6 603 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 MICALCLQ6ZW33 695 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 RSRC2Q7L4I2 434 aaKnown RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 RAB11FIP2Q7L804 512 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 PRPF39Q86UA1 669 aaKnown RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 GRAMD1CQ8IYS0 662 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 ADGRG5Q8IZF4 528 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 ADGRF2Q8IZF7 708 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 NUP93Q8N1F7 819 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 POC1BQ8TC44 478 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 FBXO32Q969P5 355 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 OMDQ99983 421 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 TIPINQ9BVW5 301 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 SLC2A11Q9BYW1 496 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 LSG1Q9H089 658 aaKnown RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 TMEM245Q9H330 911 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 EBF2Q9HAK2 575 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 GPR35Q9HC97 309 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 PRDM8Q9NQV8 689 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 PNPOQ9NVS9 261 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 PLK2Q9NYY3 685 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 FOXJ2Q9P0K8 574 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 CHORDC1Q9UHD1 332 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-223ENST00000553686 TLK1Q9UKI8 766 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 CDH9Q9ULB4 789 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 L1RE1Q9UN81 338 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF510Q9Y2H8 683 aa6.03□□□□□ -1.44
ATXN3-223ENST00000553686 EME2A4GXA9 379 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 F5H697 171 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 F8VP50 259 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 SCAMP1O15126 338 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 MATN4O95460 622 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 CHEK2O96017 543 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 PENKP01210 267 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 UGT1A5P35504 534 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 ATP5C1P36542 298 aaKnown RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 SRSF6Q13247 344 aaKnown RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 HLXQ14774 488 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 TTC22Q5TAA0 569 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 TMPRSS9Q7Z410 1059 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 VASH2Q86V25 355 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 PPP1R3BQ86XI6 285 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 ADGRG3Q86Y34 549 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 TMEM161BQ8NDZ6 487 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 TOR1AIP2Q8NFQ8 470 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 ACTRT2Q8TDY3 377 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 MYLPFQ96A32 169 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 FBXL20Q96IG2 436 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 PIWIL1Q96J94 861 aaKnown RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 PDLIM2Q96JY6 352 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 SYT15Q9BQS2 421 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 MSTO1Q9BUK6 570 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 DUSP26Q9BV47 211 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 NEUROG2Q9H2A3 272 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 PABPC3Q9H361 631 aaKnown RBP6.02□□□□□ -1.45
ATXN3-223ENST00000553686 KIAA1586Q9HCI6 787 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 PRSS16Q9NQE7 514 aa6.02□□□□□ -1.45
ATXN3-223ENST00000553686 COMMD8Q9NX08 183 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms