RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 MAP7D2Q96T17 732 aa6.31□□□□□ -1.4
PCNX1-205ENST00000553508 LTB4R2Q9NPC1 389 aa6.31□□□□□ -1.4
PCNX1-205ENST00000553508 LIMA1Q9UHB6 759 aaKnown RBP6.31□□□□□ -1.4
PCNX1-205ENST00000553508 DLGAP4Q9Y2H0 992 aa6.31□□□□□ -1.4
PCNX1-205ENST00000553508 TMEM98Q9Y2Y6 226 aa6.31□□□□□ -1.4
PCNX1-205ENST00000553508 KCNE2Q9Y6J6 123 aa6.31□□□□□ -1.4
PCNX1-205ENST00000553508 CD109Q6YHK3 1445 aa6.31□□□□□ -1.4
PCNX1-205ENST00000553508 ABCA8O94911 1581 aa6.31□□□□□ -1.4
PCNX1-205ENST00000553508 PRXQ9BXM0 1461 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 ERVV-2B6SEH9 535 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 IPO7O95373 1038 aaKnown RBP6.3□□□□□ -1.4
PCNX1-205ENST00000553508 TERF1P54274 439 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 MED22Q15528 200 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 NFE4Q86UQ8 179 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 FRMD1Q8N878 549 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 OR52I2Q8NH67 350 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 ZKSCAN4Q969J2 545 aaPredicted RBP6.3□□□□□ -1.4
PCNX1-205ENST00000553508 LINGO1Q96FE5 620 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 PPM1MQ96MI6 270 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 NEURL2Q9BR09 285 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 LRRC1Q9BTT6 524 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 LRMDAQ9H2I8 198 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 PIGMQ9H3S5 423 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 FKRPQ9H9S5 495 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 CLIC4Q9Y696 253 aa6.3□□□□□ -1.4
PCNX1-205ENST00000553508 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.29□□□□□ -1.4
PCNX1-205ENST00000553508 A0A1W2PQF6 199 aa6.29□□□□□ -1.4
PCNX1-205ENST00000553508 ATP2A1O14983 1001 aa6.29□□□□□ -1.4
PCNX1-205ENST00000553508 ANKRD28O15084 1053 aa6.29□□□□□ -1.4
PCNX1-205ENST00000553508 FAM106CPP0CH98 169 aa6.29□□□□□ -1.4
PCNX1-205ENST00000553508 PLIN5Q00G26 463 aa6.29□□□□□ -1.4
PCNX1-205ENST00000553508 SDCCAG8Q86SQ7 713 aaPredicted RBP6.29□□□□□ -1.4
PCNX1-205ENST00000553508 EPHX4Q8IUS5 362 aa6.29□□□□□ -1.4
PCNX1-205ENST00000553508 STK39Q9UEW8 545 aa6.29□□□□□ -1.4
PCNX1-205ENST00000553508 EEA1Q15075 1411 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 FAM90A26D6RGX4 464 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 KCNN4O15554 427 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 HSPA1AP0DMV8 641 aaKnown RBP6.28□□□□□ -1.4
PCNX1-205ENST00000553508 HSPA1BP0DMV9 641 aaKnown RBP6.28□□□□□ -1.4
PCNX1-205ENST00000553508 NFKBIAP25963 317 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 BSGP35613 385 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 UBA7P41226 1012 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 PRCPP42785 496 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
PCNX1-205ENST00000553508 PDE1CQ14123 709 aaPredicted RBP6.28□□□□□ -1.4
PCNX1-205ENST00000553508 PNLIPRP3Q17RR3 467 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 MYLK3Q32MK0 819 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 LRIF1Q5T3J3 769 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 PMS2CLQ68D20 193 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 PLA2G4FQ68DD2 849 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 OR1J2Q8NGS2 313 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 THAP6Q8TBB0 222 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 HM13Q8TCT9 377 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 UTP15Q8TED0 518 aaKnown RBP6.28□□□□□ -1.4
PCNX1-205ENST00000553508 DNAAF4Q8WXU2 420 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 RRP7BPQ9NSQ0 103 aa6.28□□□□□ -1.4
PCNX1-205ENST00000553508 MAP3K20Q9NYL2 800 aaKnown RBP6.28□□□□□ -1.4
PCNX1-205ENST00000553508 EIF3DO15371 548 aaKnown RBP eCLIP6.27□□□□□ -1.41
PCNX1-205ENST00000553508 CLEC3BP05452 202 aa6.27□□□□□ -1.41
PCNX1-205ENST00000553508 PRSS1P07477 247 aa6.27□□□□□ -1.41
PCNX1-205ENST00000553508 NAB2Q15742 525 aa6.27□□□□□ -1.41
PCNX1-205ENST00000553508 GSG1LQ6UXU4 331 aa6.27□□□□□ -1.41
PCNX1-205ENST00000553508 KLHDC8BQ8IXV7 354 aa6.27□□□□□ -1.41
PCNX1-205ENST00000553508 ADSSL1Q8N142 457 aa6.27□□□□□ -1.41
PCNX1-205ENST00000553508 TDRD7Q8NHU6 1098 aaKnown RBP6.27□□□□□ -1.41
PCNX1-205ENST00000553508 FBXO17Q96EF6 278 aa6.27□□□□□ -1.41
PCNX1-205ENST00000553508 UPF2Q9HAU5 1272 aaKnown RBP6.27□□□□□ -1.41
PCNX1-205ENST00000553508 CWC15Q9P013 229 aaKnown RBP6.27□□□□□ -1.41
PCNX1-205ENST00000553508 ARAP3Q8WWN8 1544 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 ZCWPW2A0A1B0GU75 182 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 EIF4E1BA6NMX2 242 aaKnown RBP6.26□□□□□ -1.41
PCNX1-205ENST00000553508 PRSS47A8MTI9 375 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 TBX18O95935 607 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 CD53P19397 219 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 UGT1A1P22309 533 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 PIK3CAP42336 1068 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 GALCP54803 685 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 KRTAP27-1Q3LI81 207 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 KRTCAP3Q53RY4 240 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 ZNF805Q5CZA5 627 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 NSUN5P2Q63ZY6 315 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 PAPD4Q6PIY7 484 aaKnown RBP6.26□□□□□ -1.41
PCNX1-205ENST00000553508 SEPT14Q6ZU15 432 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 PDILTQ8N807 584 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 OR8K5Q8NH50 307 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 TMEM255BQ8WV15 326 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 UCMAQ8WVF2 138 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 SEMA3CQ99985 751 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 SCRT2Q9NQ03 307 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 TCP11L1Q9NUJ3 509 aa6.26□□□□□ -1.41
PCNX1-205ENST00000553508 MARCH4Q9P2E8 410 aaPredicted RBP6.26□□□□□ -1.41
PCNX1-205ENST00000553508 ABCA9Q8IUA7 1624 aa6.25□□□□□ -1.41
PCNX1-205ENST00000553508 OR5K3A6NET4 321 aa6.25□□□□□ -1.41
PCNX1-205ENST00000553508 J3KRW8 73 aa6.25□□□□□ -1.41
PCNX1-205ENST00000553508 NDUFS3O75489 264 aa6.25□□□□□ -1.41
PCNX1-205ENST00000553508 ICAM1P05362 532 aa6.25□□□□□ -1.41
PCNX1-205ENST00000553508 ANOS1P23352 680 aa6.25□□□□□ -1.41
PCNX1-205ENST00000553508 HOXA1P49639 335 aaPredicted RBP6.25□□□□□ -1.41
PCNX1-205ENST00000553508 RUNX1T1Q06455 604 aa6.25□□□□□ -1.41
PCNX1-205ENST00000553508 RBM39Q14498 530 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms