RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 KCND3Q9UK17 655 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 PCDHGA6Q9Y5G7 932 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 ICE1Q9Y2F5 2266 aa21.34■■□□□ 1.01
SMARCD1-212ENST00000551966 PIPSLA2A3N6 862 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 MFSD11O43934 449 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 RECKO95980 971 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 AMD1P17707 334 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 RPL26P61254 145 aaKnown RBP21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 SLC25A11Q02978 314 aaKnown RBP21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 GALNT2Q10471 571 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 QPCTQ16769 361 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 ANKRD20A8PQ5CZ79 823 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 PHYKPLQ8IUZ5 450 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 APLFQ8IW19 511 aaPredicted RBP21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 AVL9Q8NBF6 648 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 FAM71BQ8TC56 605 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 BTBD6Q96KE9 485 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 ISCUQ9H1K1 167 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 PADI1Q9ULC6 663 aa21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 RPL26L1Q9UNX3 145 aaKnown RBP21.33■■□□□ 1.01
SMARCD1-212ENST00000551966 RGSL1A5PLK6 1076 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 VPS4BO75351 444 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 TIAF1O95411 115 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 VIPP01282 170 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 CCNYL3P0C7X3 344 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 ZNF165P49910 485 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 SEMA5AQ13591 1074 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 DNASE1L3Q13609 305 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 ASIC2Q16515 512 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 FHL5Q5TD97 284 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 ADGRG6Q86SQ4 1221 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 GALNT11Q8NCW6 608 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 CT55Q8WUE5 264 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 KLHL6Q8WZ60 621 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 RUFY1Q96T51 708 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 OSGEPL1Q9H4B0 414 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 TRIM39Q9HCM9 518 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 LHX9Q9NQ69 397 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 LMBRD1Q9NUN5 540 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 PKD2L2Q9NZM6 624 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 LNPEPQ9UIQ6 1025 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 VPS4AQ9UN37 437 aa21.32■■□□□ 1
SMARCD1-212ENST00000551966 ZNF106Q9H2Y7 1883 aaKnown RBP21.32■■□□□ 1
SMARCD1-212ENST00000551966 TNRC6AQ8NDV7 1962 aaKnown RBP21.31■■□□□ 1
SMARCD1-212ENST00000551966 TTLL8A6PVC2 850 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 ANKRD66B4E2M5 251 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 CHUKO15111 745 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 AGFG2O95081 481 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 HLA-DQB2P05538 268 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 MMP2P08253 660 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 RNF224P0DH78 156 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 SKILP12757 684 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 BRAFP15056 766 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 CCNCP24863 283 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 PRKCIP41743 596 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 ARSEP51690 589 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 PIGHQ14442 188 aaPredicted RBP21.31■■□□□ 1
SMARCD1-212ENST00000551966 PAFAH1B3Q15102 231 aaKnown RBP21.31■■□□□ 1
SMARCD1-212ENST00000551966 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.31■■□□□ 1
SMARCD1-212ENST00000551966 NCBP2-AS2Q69YL0 99 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 GPR26Q8NDV2 337 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 RSC1A1Q92681 617 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 TSGA13Q96PP4 275 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 MLPHQ9BV36 600 aaPredicted RBP21.31■■□□□ 1
SMARCD1-212ENST00000551966 AMACRQ9UHK6 382 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 TTLL3Q9Y4R7 772 aa21.31■■□□□ 1
SMARCD1-212ENST00000551966 SEMA7AO75326 666 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 RASSF9O75901 435 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 SLC25A14O95258 325 aaPredicted RBP21.3■■□□□ 1
SMARCD1-212ENST00000551966 MYBL1P10243 752 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 KRT81Q14533 505 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 PLA2G4EQ3MJ16 856 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 ATP13A4Q4VNC1 1196 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 CCDC122Q5T0U0 273 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 FAM182AQ5T1J6 154 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 CACHD1Q5VU97 1274 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 PRSS42Q7Z5A4 293 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 NIPA2Q8N8Q9 360 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 CPT1CQ8TCG5 803 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 CCHCR1Q8TD31 782 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 FATE1Q969F0 183 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 SLC40A1Q9NP59 571 aa21.3■■□□□ 1
SMARCD1-212ENST00000551966 RCOR3Q9P2K3 495 aaPredicted RBP21.3■■□□□ 1
SMARCD1-212ENST00000551966 ZNF7P17097 686 aaPredicted RBP21.29■■□□□ 1
SMARCD1-212ENST00000551966 SEPT7Q16181 437 aaKnown RBP21.29■■□□□ 1
SMARCD1-212ENST00000551966 IFI16Q16666 785 aaKnown RBP21.29■■□□□ 1
SMARCD1-212ENST00000551966 NADK2Q4G0N4 442 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 TDRD12Q587J7 1177 aaKnown RBP21.29■■□□□ 1
SMARCD1-212ENST00000551966 TIGD7Q6NT04 549 aaPredicted RBP21.29■■□□□ 1
SMARCD1-212ENST00000551966 FAM199XQ6PEV8 388 aaPredicted RBP21.29■■□□□ 1
SMARCD1-212ENST00000551966 CRTC3Q6UUV7 619 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 ABRAXAS1Q6UWZ7 409 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 FAM92BQ6ZTR7 304 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 PPP1R3BQ86XI6 285 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 ZNF547Q8IVP9 402 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 TRIM11Q96F44 468 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 SPATA16Q9BXB7 569 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 ACTL8Q9H568 366 aa21.29■■□□□ 1
SMARCD1-212ENST00000551966 RTN4Q9NQC3 1192 aaKnown RBP21.29■■□□□ 1
SMARCD1-212ENST00000551966 ANO10Q9NW15 660 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms