RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 HMGCLP35914 325 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 GPR3P46089 330 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 EIF3IQ13347 325 aaKnown RBP12.87□□□□□ -0.35
NPAS3-209ENST00000551008 SLC1A5Q15758 541 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 MAP9Q49MG5 647 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 ATP13A5Q4VNC0 1218 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 IYDQ6PHW0 289 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 PID1Q7Z2X4 250 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 RCBTB1Q8NDN9 531 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 IPMKQ8NFU5 416 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 CCDC74BQ96LY2 380 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 PLEKHG4BQ96PX9 1271 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 VAT1Q99536 393 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 BAG1Q99933 345 aaPredicted RBP12.87□□□□□ -0.35
NPAS3-209ENST00000551008 RMI1Q9H9A7 625 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 TRIM39Q9HCM9 518 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 IL26Q9NPH9 171 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 FOXJ2Q9P0K8 574 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 PISDQ9UG56 409 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 ACSL6Q9UKU0 697 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
NPAS3-209ENST00000551008 PCDHGA7Q9Y5G6 932 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 CAPN6Q9Y6Q1 641 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 PRAMEF33A0A0G2JMD5 474 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 TCRBV7S2A1N4TA0A589 114 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 CCDC66A2RUB6 948 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 C9orf172C9J069 976 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 H7C0C1 242 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 BUD23O43709 281 aaKnown RBP12.86□□□□□ -0.35
NPAS3-209ENST00000551008 PRAMEF10O60809 474 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 SLC25A14O95258 325 aaPredicted RBP12.86□□□□□ -0.35
NPAS3-209ENST00000551008 AGTP01019 485 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 CCL4P13236 92 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 PSMB4P28070 264 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 ATP5OP48047 213 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 CLCNKAP51800 687 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 LIMK2P53671 638 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 UBE2IP63279 158 aaKnown RBP12.86□□□□□ -0.35
NPAS3-209ENST00000551008 KLF1Q13351 362 aaPredicted RBP12.86□□□□□ -0.35
NPAS3-209ENST00000551008 MPP3Q13368 585 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 TGIF1Q15583 401 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 PLA2G4EQ3MJ16 856 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 PHF19Q5T6S3 580 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 PDPK2PQ6A1A2 396 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 CRTC3Q6UUV7 619 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 XKR5Q6UX68 686 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 SNRNP27Q8WVK2 155 aaKnown RBP12.86□□□□□ -0.35
NPAS3-209ENST00000551008 CCDC97Q96F63 343 aaPredicted RBP12.86□□□□□ -0.35
NPAS3-209ENST00000551008 VPS35Q96QK1 796 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 STRADBQ9C0K7 418 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 LUC7LQ9NQ29 371 aaKnown RBP12.86□□□□□ -0.35
NPAS3-209ENST00000551008 PRDM8Q9NQV8 689 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 RSPH14Q9UHP6 348 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 TRHDEQ9UKU6 1024 aa12.86□□□□□ -0.35
NPAS3-209ENST00000551008 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.86□□□□□ -0.35
NPAS3-209ENST00000551008 PIEZO2Q9H5I5 2752 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 MACROD2A1Z1Q3 448 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 TMX2-CTNND1H3BSU7 103 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 UGT1A9O60656 530 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 C1QL1O75973 258 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 FTCDO95954 541 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 RBP3P10745 1247 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 THRAP10827 490 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 FGF3P11487 239 aaPredicted RBP12.85□□□□□ -0.35
NPAS3-209ENST00000551008 F3P13726 295 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 BRAFP15056 766 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 UGT1A6P19224 532 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 HLA-DPA1P20036 260 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 UGT1A1P22309 533 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 UGT1A4P22310 534 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 MPSTP25325 297 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 UGT1A3P35503 534 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 RWDD2BP57060 319 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 EIF3EP60228 445 aaKnown RBP12.85□□□□□ -0.35
NPAS3-209ENST00000551008 CXADRP78310 365 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 HHEXQ03014 270 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 CHRNA6Q15825 494 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 CLPPQ16740 277 aaPredicted RBP12.85□□□□□ -0.35
NPAS3-209ENST00000551008 ANKRD20A2Q5SQ80 823 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 ANKRD20A1Q5TYW2 823 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 ANKRD20A3Q5VUR7 823 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 DENND5AQ6IQ26 1287 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 RANBP10Q6VN20 620 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 PIM3Q86V86 326 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 PHYKPLQ8IUZ5 450 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 SPC24Q8NBT2 197 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 CCDC110Q8TBZ0 833 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 APOL2Q9BQE5 337 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 FICDQ9BVA6 458 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 DPH1Q9BZG8 443 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 TRABDQ9H4I3 376 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 UGT1A7Q9HAW7 530 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 UGT1A10Q9HAW8 530 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 UGT1A8Q9HAW9 530 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 SARS2Q9NP81 518 aaKnown RBP12.85□□□□□ -0.35
NPAS3-209ENST00000551008 OGFRQ9NZT2 677 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 ZNF624Q9P2J8 865 aaPredicted RBP12.85□□□□□ -0.35
NPAS3-209ENST00000551008 PDP2Q9P2J9 529 aa12.85□□□□□ -0.35
NPAS3-209ENST00000551008 R3HDM2Q9Y2K5 976 aaKnown RBP12.85□□□□□ -0.35
NPAS3-209ENST00000551008 KCTD3Q9Y597 815 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms