RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SGTAO43765 313 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 FAM189A1O60320 539 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 SNX4O95219 450 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 ZNF182P17025 639 aaPredicted RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 GAD2Q05329 585 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 HKDC1Q2TB90 917 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 ESRP1Q6NXG1 681 aaKnown RBP15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 MPP5Q8N3R9 675 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 BPIFA1Q9NP55 256 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 SIRPGQ9P1W8 387 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 SLC17A6Q9P2U8 582 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 RGPD2P0DJD1 1756 aa15.7■□□□□ 0.1
RBFOX1-212ENST00000550418 ANKDD1BA6NHY2 528 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 M0QX08 132 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 RSL1D1O76021 490 aaKnown RBP15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ENO2P09104 434 aaPredicted RBP15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 UROSP10746 265 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 PRG2P13727 222 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 DARSP14868 501 aaKnown RBP15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 EPORP19235 508 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 PTGS2P35354 604 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 GMFBP60983 142 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ZNF423Q2M1K9 1284 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ARRDC4Q8NCT1 418 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ANKRD49Q8WVL7 239 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 BCAS3Q9H6U6 928 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 CPA4Q9UI42 421 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 SLC25A13Q9UJS0 675 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ADAMTS6Q9UKP5 1117 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 HTRA2O43464 458 aaPredicted RBP15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ORC5O43913 435 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 GABBR2O75899 941 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 RPL3P39023 403 aaKnown RBP15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 IRF9Q00978 393 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 MADCAM1Q13477 382 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 TLR1Q15399 786 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 TXNRD3NBQ6F5E7 133 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 TMEM53Q6P2H8 277 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 MEIOBQ8N635 442 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 DCBLD1Q8N8Z6 715 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 OR5K1Q8NHB7 308 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ZFP28Q8NHY6 868 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 C11orf24Q96F05 449 aaPredicted RBP15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 LRRC3Q9BY71 257 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 DCSTAMPQ9H295 470 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 TCAF1Q9Y4C2 921 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 NPEPPSL1A6NEC2 478 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ARHGEF33A8MVX0 844 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ADM5C9JUS6 153 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 TNFRSF11BO00300 401 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ARPC2O15144 300 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 NKRFO15226 690 aaKnown RBP eCLIP15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 PGRP06401 933 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 NPTX1Q15818 432 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 RAP1GAP2Q684P5 730 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 ZDHHC21Q8IVQ6 265 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 KCNS3Q9BQ31 491 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 TOR3AQ9H497 397 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 PRDM8Q9NQV8 689 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 EXD2Q9NVH0 621 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 DTLQ9NZJ0 730 aa15.69■□□□□ 0.1
RBFOX1-212ENST00000550418 TP73O15350 636 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 COL6A1P12109 1028 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 TUBA3CQ13748 450 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 TGFBIQ15582 683 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 AKIRIN2Q53H80 203 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 NUDT18Q6ZVK8 323 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 RNF38Q9H0F5 515 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 IRF2BPLQ9H1B7 796 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 TTYH1Q9H313 450 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 CXCR6O00574 342 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 YES1P07947 543 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 EEFSECP57772 596 aaKnown RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 KCNJ11Q14654 390 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 SYT16Q17RD7 645 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 ANXA8L1Q5VT79 327 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 UBE2J2Q8N2K1 259 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 ATL1Q8WXF7 558 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 FCRL2Q96LA5 508 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 PGLYRP2Q96PD5 576 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 SLC39A3Q9BRY0 314 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 MRIQ9BWK5 157 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 ADAM7Q9H2U9 754 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 SPATA31C2B4DYI2 1134 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 CLDN5O00501 218 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 PRMT5O14744 637 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 ICAM3P32942 547 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 GRIA1P42261 906 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 MAPKAPK2P49137 400 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 MXD1Q05195 221 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 TGM3Q08188 693 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 KLF1Q13351 362 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 DNASE1L3Q13609 305 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 INTS6LQ5JSJ4 861 aaKnown RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 MBLAC2Q68D91 279 aa15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 LDB1Q86U70 411 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 IPCEF1Q8WWN9 437 aaPredicted RBP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 UPF1Q92900 1129 aaKnown RBP eCLIP15.68■□□□□ 0.1
RBFOX1-212ENST00000550418 MCUBQ9NWR8 336 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms