RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 LRRTM4Q86VH4 590 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZFAND4Q86XD8 727 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 PLXDC1Q8IUK5 500 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 RBM12BQ8IXT5 1001 aaKnown RBP10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 RCBTB1Q8NDN9 531 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 GPR26Q8NDV2 337 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 TTC25Q96NG3 672 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 VPS35Q96QK1 796 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 FCRL5Q96RD9 977 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 EFHD1Q9BUP0 239 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZCCHC2Q9C0B9 1178 aaKnown RBP10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 OR2AG1Q9H205 316 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 SLC39A1Q9NY26 324 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 KLHL8Q9P2G9 620 aaPredicted RBP10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 ATXN10Q9UBB4 475 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 CPNE7Q9UBL6 633 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 TBC1D29Q9UFV1 150 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 KCNK6Q9Y257 313 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 EFR3BQ9Y2G0 817 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 PCDHA13Q9Y5I0 950 aa10.75□□□□□ -0.69
VTI1BP3-201ENST00000550220 ANKRD36A6QL64 1941 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 ARHGEF17Q96PE2 2063 aaPredicted RBP10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 TRBV23OR9-2A0A075B6M9 112 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 A6NCN8 305 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 LILRA5A6NI73 299 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 TOX3O15405 576 aaPredicted RBP10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 SNX2O60749 519 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 C1QL1O75973 258 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 CDK14O94921 469 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 MT-CYBP00156 380 aaPredicted RBP10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 VIPP01282 170 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 PRB1P04280 392 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 FGF3P11487 239 aaPredicted RBP10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF8P17098 575 aaPredicted RBP10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 BPIP17213 487 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 HLA-DPA1P20036 260 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 IDSP22304 550 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 ETV5P41161 510 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 CETN2P41208 172 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 NFATC2Q13469 925 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 TGIF1Q15583 401 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 PPP2R5EQ16537 467 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 ALS2CLQ60I27 953 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 KAZNQ674X7 775 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 C11orf63Q6NUN7 778 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 WASH2PQ6VEQ5 465 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 ARHGAP22Q7Z5H3 698 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 ADGRG6Q86SQ4 1221 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 CCDC50Q8IVM0 306 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 TRIM48Q8IWZ4 208 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 SPATA22Q8NHS9 363 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 HTR3CQ8WXA8 447 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 NCSTNQ92542 709 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 EID2BQ96D98 161 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 PPP1R2P1Q96PQ5 205 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 ARHGAP9Q9BRR9 750 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 TIMM29Q9BSF4 260 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 CEP41Q9BYV8 373 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 TRIT1Q9H3H1 467 aaKnown RBP10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 WASH6PQ9NQA3 447 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 FBXO8Q9NRD0 319 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 KLC4Q9NSK0 619 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 FOXJ2Q9P0K8 574 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 PRKAB1Q9Y478 270 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 ADGRG1Q9Y653 693 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 DNMT3AQ9Y6K1 912 aaPredicted RBP10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 LRP4O75096 1905 aa10.74□□□□□ -0.69
VTI1BP3-201ENST00000550220 LOC400499M0QZD8 3231 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 hCG_1818297A0A087WSY0 165 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 KLHL33A6NCF5 533 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 EFCAB7A8K855 629 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 B8ZZF3 427 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 APOC4-APOC2K7ER74 178 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 ANXA9O76027 345 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 APOC2P02655 101 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 ZNF7P17097 686 aaPredicted RBP10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 MAP4P27816 1152 aaKnown RBP10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 CSF2RBP32927 897 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 WNT3AP56704 352 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 MC2RQ01718 297 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 WASHC5Q12768 1159 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 ITGA9Q13797 1035 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 INSCQ1MX18 579 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 LDLRAP1Q5SW96 308 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 CCDC181Q5TID7 509 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 AGAP9Q5VTM2 703 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 KIAA1614Q5VZ46 1190 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 ITPRIPL1Q6GPH6 555 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 CYB5D1Q6P9G0 228 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 ABRAXAS1Q6UWZ7 409 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 CEACAM20Q6UY09 585 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 BBS12Q6ZW61 710 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 DAAM2Q86T65 1068 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 FAM129CQ86XR2 697 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 TMTC1Q8IUR5 882 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 IL22RA1Q8N6P7 574 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 TC2NQ8N9U0 490 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 GDAP1Q8TB36 358 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 ART4Q93070 314 aa10.73□□□□□ -0.69
VTI1BP3-201ENST00000550220 LRRC45Q96CN5 670 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms