RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 LCMT1Q9UIC8 334 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 KCND3Q9UK17 655 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 A0A1W2PQJ5 194 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 PRR19A6NJB7 356 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 MKRN2OSH3BPM6 223 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 KMOO15229 486 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 UBXN7O94888 489 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 SERPINC1P01008 464 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 SERPING1P05155 500 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 KRT7P08729 469 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 ZNF8P17098 575 aaPredicted RBP13.39□□□□□ -0.27
TROAP-211ENST00000549891 GJC1P36383 396 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 DLSTP36957 453 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 CD86P42081 329 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 DCDC1P59894 354 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 NFKBIBQ15653 356 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 IGFBP7Q16270 282 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 INSCQ1MX18 579 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 TMEM26Q6ZUK4 368 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 RASGRP3Q8IV61 690 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 CCDC13Q8IYE1 715 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 PLEKHG4BQ96PX9 1271 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 OR2AG1Q9H205 316 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 ZNF768Q9H5H4 540 aaKnown RBP13.39□□□□□ -0.27
TROAP-211ENST00000549891 ZFYVE1Q9HBF4 777 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 RELNP78509 3460 aa13.39□□□□□ -0.27
TROAP-211ENST00000549891 LRRK2Q5S007 2527 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 RASSF9O75901 435 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 MT-ND3P03897 115 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 CCNYL3P0C7X3 344 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 GP1BBP13224 206 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 GFERP55789 205 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 NR1I3Q14994 352 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 ZFYVE27Q5T4F4 411 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 TCTN3Q6NUS6 607 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 LRRTM4Q86VH4 590 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 ATCAYQ86WG3 371 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 RBM12BQ8IXT5 1001 aaKnown RBP13.38□□□□□ -0.27
TROAP-211ENST00000549891 FAM26EQ8N5C1 309 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 TRAM1L1Q8N609 369 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 FAF2Q96CS3 445 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 ZDHHC12Q96GR4 267 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 NAP1L5Q96NT1 182 aaPredicted RBP13.38□□□□□ -0.27
TROAP-211ENST00000549891 TGM7Q96PF1 710 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 OR6C1Q96RD1 312 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 TIMM29Q9BSF4 260 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 POT1Q9NUX5 634 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 POLHQ9Y253 713 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 ADGRG1Q9Y653 693 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 KCNMB2Q9Y691 235 aa13.38□□□□□ -0.27
TROAP-211ENST00000549891 A0A087X0T9 212 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 CLEC18AA5D8T8 446 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 PDZK1P1A8MUH7 402 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 CHUKO15111 745 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 NDUFA10O95299 355 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 JCHAINP01591 159 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 MMP2P08253 660 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 FAM228BP0C875 321 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 TYRP1P17643 537 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 VCLP18206 1134 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
TROAP-211ENST00000549891 SEPHS1P49903 392 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 GBE1Q04446 702 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
TROAP-211ENST00000549891 GALNT3Q14435 633 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 ATP13A4Q4VNC1 1196 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 ATP1A1-AS1Q5TC04 95 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 ALS2CLQ60I27 953 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 ALKBH5Q6P6C2 394 aaKnown RBP13.37□□□□□ -0.27
TROAP-211ENST00000549891 CRTC3Q6UUV7 619 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 CLEC18BQ6UXF7 455 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 PRSS42Q7Z5A4 293 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 ADGRG6Q86SQ4 1221 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 TEX19Q8NA77 164 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 CLEC18CQ8NCF0 446 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 GALNT6Q8NCL4 622 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 GLYATL1Q969I3 302 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 SRPK1Q96SB4 655 aaKnown RBP13.37□□□□□ -0.27
TROAP-211ENST00000549891 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 DTLQ9NZJ0 730 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 OGFRQ9NZT2 677 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 NFKBIL1Q9UBC1 381 aaPredicted RBP13.37□□□□□ -0.27
TROAP-211ENST00000549891 CROTQ9UKG9 612 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 TP53TG5Q9Y2B4 290 aa13.37□□□□□ -0.27
TROAP-211ENST00000549891 MRPS18BQ9Y676 258 aaKnown RBP13.37□□□□□ -0.27
TROAP-211ENST00000549891 KCNK1O00180 336 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 VEGFDO43915 354 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 KATNA1O75449 491 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 RFPL1O75677 317 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 KIAA0754O94854 1291 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 PROSCO94903 275 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 RECKO95980 971 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 FGF5P12034 268 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 ZNF7P17097 686 aaPredicted RBP13.36□□□□□ -0.27
TROAP-211ENST00000549891 IDSP22304 550 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 F8A1P23610 371 aa13.36□□□□□ -0.27
TROAP-211ENST00000549891 SLC19A1P41440 591 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms