RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 XIAPP98170 497 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 CDH17Q12864 832 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 TMEM115Q12893 351 aaPredicted RBP18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 TARDBPQ13148 414 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 PEX6Q13608 980 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 CERCAMQ5T4B2 595 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 CDCP2Q5VXM1 449 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 TTC27Q6P3X3 843 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 CRTC3Q6UUV7 619 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 UNQ6494/PRO21346Q6UXR6 183 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 C4orf22Q6V702 233 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 C17orf82Q86X59 251 aaPredicted RBP18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 NAGSQ8N159 534 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 CACTIN-AS1Q8N1I8 211 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 DNAAF3Q8N9W5 541 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 DDHD1Q8NEL9 900 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 OR6C4Q8NGE1 309 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 PATE1Q8WXA2 126 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 MAGOHBQ96A72 148 aaKnown RBP18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 SMOXQ9NWM0 555 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 APPL1Q9UKG1 709 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 KCNK6Q9Y257 313 aa18.5■□□□□ 0.55
PRPF40B-206ENST00000547764 CCL22O00626 93 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 CES2O00748 559 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 ZNF185O15231 689 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 SRP72O76094 671 aaKnown RBP18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 HADHAP40939 763 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 MAZP56270 477 aaKnown RBP18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 CAMK2BQ13554 666 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 SEPT6Q14141 434 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 CYP1B1Q16678 543 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 LDLRAP1Q5SW96 308 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 GPRC6AQ5T6X5 926 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 PPP1R21Q6ZMI0 780 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 ZNF547Q8IVP9 402 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 DCBLD1Q8N8Z6 715 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 DNAJC1Q96KC8 554 aaKnown RBP18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 ASB8Q9H765 288 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 CASS4Q9NQ75 786 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 LRIT1Q9P2V4 623 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 RNF215Q9Y6U7 377 aa18.49■□□□□ 0.55
PRPF40B-206ENST00000547764 ZFC3H1O60293 1989 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 ZNF106Q9H2Y7 1883 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 FRYQ5TBA9 3013 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 MROH6A6NGR9 719 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 KMOO15229 486 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 NUDT21O43809 227 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 EML2O95834 649 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 COILP38432 576 aaPredicted RBP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 BASP1P80723 227 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 NFATC2Q13469 925 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 GTF2H3Q13889 308 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 TRIP13Q15645 432 aaPredicted RBP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 LRRTM4Q86VH4 590 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 ARL14Q8N4G2 192 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 RASGEF1AQ8N9B8 481 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 TTC25Q96NG3 672 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 EIF2B3Q9NR50 452 aaKnown RBP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 KLC4Q9NSK0 619 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 NLE1Q9NVX2 485 aaPredicted RBP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 TBC1D29Q9UFV1 150 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 SLC23A2Q9UGH3 650 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 MYLKQ15746 1914 aa18.48■□□□□ 0.55
PRPF40B-206ENST00000547764 AGAP14A8MT82 685 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 GAS8O95995 478 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 PNLIPP16233 465 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 ZNF7P17097 686 aaPredicted RBP18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 TCP1P17987 556 aaKnown RBP18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 PLA2G4EQ3MJ16 856 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 CCDC38Q502W7 563 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 MICALCLQ6ZW33 695 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 TRAPPC5Q8IUR0 188 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 Q8N9G6 341 aaPredicted RBP18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 STYXQ8WUJ0 223 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 ZCCHC2Q9C0B9 1178 aaKnown RBP18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 FAM96AQ9H5X1 160 aa18.47■□□□□ 0.55
PRPF40B-206ENST00000547764 BPTFQ12830 3046 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 TRBV23OR9-2A0A075B6M9 112 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 CCDC78A2IDD5 438 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 A6NCN8 305 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 TRABD2BA6NFA1 517 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 H7C0S8 307 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 NTN3O00634 580 aaPredicted RBP18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 SNX2O60749 519 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 KRT14P02533 472 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 ITGALP20701 1170 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 PSMA3P25788 255 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 MC4RP32245 332 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 CLCNKAP51800 687 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 CTSCP53634 463 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 CCL7P80098 99 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 INSCQ1MX18 579 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 PAPD7Q5XG87 772 aaKnown RBP18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 CCDC137Q6PK04 289 aaKnown RBP18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 SNX20Q7Z614 316 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 C11orf96Q7Z7L8 435 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 WDR48Q8TAF3 677 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 CDKN2AIPNLQ96HQ2 116 aa18.46■□□□□ 0.55
PRPF40B-206ENST00000547764 DEPDC7Q96QD5 511 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms