RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 GPR45Q9Y5Y3 372 aa15.39■□□□□ 0.05
BRF1-212ENST00000547562 OBSL1O75147 1896 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 C9JVG2 144 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 NME4O00746 187 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 SCAMP3O14828 347 aaKnown RBP15.38■□□□□ 0.05
BRF1-212ENST00000547562 SNX2O60749 519 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 STAMBPO95630 424 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 MBL2P11226 248 aaPredicted RBP15.38■□□□□ 0.05
BRF1-212ENST00000547562 ZNF26P17031 533 aaPredicted RBP15.38■□□□□ 0.05
BRF1-212ENST00000547562 PPP3CCP48454 512 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 DIO3P55073 304 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 COQ5Q5HYK3 327 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 UGT3A1Q6NUS8 523 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 BLOC1S3Q6QNY0 202 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 SPATA19Q7Z5L4 167 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 STK40Q8N2I9 435 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 LRTOMTQ8WZ04 291 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 UHRF1Q96T88 793 aaPredicted RBP15.38■□□□□ 0.05
BRF1-212ENST00000547562 SLC52A3Q9NQ40 469 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 FCF1Q9Y324 198 aaKnown RBP15.38■□□□□ 0.05
BRF1-212ENST00000547562 PKP3Q9Y446 797 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 ZNF711Q9Y462 761 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 FXYD1O00168 92 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 GPR39O43194 453 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 LATS1O95835 1130 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 CHEK2O96017 543 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 SOD2P04179 222 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 CYBBP04839 570 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 CDKL1Q00532 357 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 CACNG1Q06432 222 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 RBBP7Q16576 425 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 XKR7Q5GH72 579 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 C6orf52Q5T4I8 152 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 DEFB128Q7Z7B8 93 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 TMEM150AQ86TG1 271 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 OR56A4Q8NGH8 313 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 EID2BQ96D98 161 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 P2RY12Q9H244 342 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 SEMA6AQ9H2E6 1030 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 SARS2Q9NP81 518 aaKnown RBP15.38■□□□□ 0.05
BRF1-212ENST00000547562 CD274Q9NZQ7 290 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 GMPR2Q9P2T1 348 aaKnown RBP15.38■□□□□ 0.05
BRF1-212ENST00000547562 VPS51Q9UID3 782 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 OR51B4Q9Y5P0 310 aa15.38■□□□□ 0.05
BRF1-212ENST00000547562 E2F3O00716 465 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 GIPC1O14908 333 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 CLGNO14967 610 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 CSPG5O95196 566 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 PRAMEF12O95522 483 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 HMGCLP35914 325 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 MRPL19P49406 292 aaKnown RBP15.37■□□□□ 0.05
BRF1-212ENST00000547562 CLCN7P51798 805 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 ATXN7L2Q5T6C5 722 aaPredicted RBP15.37■□□□□ 0.05
BRF1-212ENST00000547562 IRAK1BP1Q5VVH5 260 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 SLC15A3Q8IY34 581 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 HJURPQ8NCD3 748 aaPredicted RBP15.37■□□□□ 0.05
BRF1-212ENST00000547562 OR2T34Q8NGX1 318 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 OR2T3Q8NH03 318 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 TSPEARQ8WU66 669 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.37■□□□□ 0.05
BRF1-212ENST00000547562 ESAMQ96AP7 390 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 CNBD2Q96M20 576 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 EFHD1Q9BUP0 239 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 GPR63Q9BZJ6 419 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 HIPK3Q9H422 1215 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 MAGEE1Q9HCI5 957 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 GID8Q9NWU2 228 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 EIF2B4Q9UI10 523 aaKnown RBP15.37■□□□□ 0.05
BRF1-212ENST00000547562 PCDHGB4Q9UN71 923 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 ASB1Q9Y576 335 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 PCDHGB5Q9Y5G0 923 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 SNX13Q9Y5W8 968 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 IQCF5A8MTL0 148 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 H0YJX3 145 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 HSD17B1P14061 328 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 ATP6V1B2P21281 511 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 GRIK2Q13002 908 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 TGFBIQ15582 683 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 DEFB115Q30KQ5 88 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 GPRIN3Q6ZVF9 776 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 LYSMD3Q7Z3D4 306 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 DNAJB7Q7Z6W7 309 aaPredicted RBP15.37■□□□□ 0.05
BRF1-212ENST00000547562 ZUFSPQ96AP4 578 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 LRRC58Q96CX6 371 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 PLEKHG4BQ96PX9 1271 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 SLC22A12Q96S37 553 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 SPATA16Q9BXB7 569 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 PAPOLBQ9NRJ5 636 aaKnown RBP15.37■□□□□ 0.05
BRF1-212ENST00000547562 AIG1Q9NVV5 245 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 CNOT6Q9ULM6 557 aaKnown RBP15.37■□□□□ 0.05
BRF1-212ENST00000547562 SLC30A1Q9Y6M5 507 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 SCN8AQ9UQD0 1980 aa15.37■□□□□ 0.05
BRF1-212ENST00000547562 COL4A6Q14031 1691 aa15.36■□□□□ 0.05
BRF1-212ENST00000547562 TYW5A2RUC4 315 aaKnown RBP15.36■□□□□ 0.05
BRF1-212ENST00000547562 PABPC4LP0CB38 370 aaKnown RBP15.36■□□□□ 0.05
BRF1-212ENST00000547562 SMIM18P0DKX4 95 aa15.36■□□□□ 0.05
BRF1-212ENST00000547562 SLC6A2P23975 617 aa15.36■□□□□ 0.05
BRF1-212ENST00000547562 CSKP41240 450 aa15.36■□□□□ 0.05
BRF1-212ENST00000547562 GRIA3P42263 894 aa15.36■□□□□ 0.05
BRF1-212ENST00000547562 FOXM1Q08050 763 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms