RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ARFGAP3Q9NP61 516 aa16.62■□□□□ 0.25
CCDC38-203ENST00000546803 CHRAC1Q9NRG0 131 aa16.62■□□□□ 0.25
CCDC38-203ENST00000546803 SYBUQ9NX95 663 aa16.62■□□□□ 0.25
CCDC38-203ENST00000546803 LRRK1Q38SD2 2015 aa16.62■□□□□ 0.25
CCDC38-203ENST00000546803 ADAMTS9Q9P2N4 1935 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 KNL1Q8NG31 2342 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 TRBV5-4A0A0C4DH59 114 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 CCDC78A2IDD5 438 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 CCDC162PA2VCL2 907 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 GIPC1O14908 333 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 GPR39O43194 453 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 MTX2O75431 263 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 RALBP11234 206 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 CKMT2P17540 419 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 MSH3P20585 1137 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 MAGEA3P43357 314 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 RPIAP49247 311 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 DUSP3P51452 185 aaPredicted RBP16.61■□□□□ 0.25
CCDC38-203ENST00000546803 PRAMEP78395 509 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 CRADDP78560 199 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 SIM1P81133 766 aaPredicted RBP16.61■□□□□ 0.25
CCDC38-203ENST00000546803 CTBSQ01459 385 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 KHDC1Q4VXA5 237 aaKnown RBP16.61■□□□□ 0.25
CCDC38-203ENST00000546803 ZRANB3Q5FWF4 1079 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 ZNF648Q5T619 568 aaPredicted RBP16.61■□□□□ 0.25
CCDC38-203ENST00000546803 AFTPHQ6ULP2 937 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 LRRTM4Q86VH4 590 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 NXPE1Q8N323 547 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 BBOF1Q8ND07 529 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 FAM46DQ8NEK8 389 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 HDAC10Q969S8 669 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC38-203ENST00000546803 DCUN1D1Q96GG9 259 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 SNF8Q96H20 258 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 ZNF514Q96K75 400 aaPredicted RBP16.61■□□□□ 0.25
CCDC38-203ENST00000546803 APOLD1Q96LR9 279 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 ZNF778Q96MU6 729 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 TRIM51Q9BSJ1 452 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 BOCQ9BWV1 1114 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 SLC2A6Q9UGQ3 507 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 SOX13Q9UN79 622 aa16.61■□□□□ 0.25
CCDC38-203ENST00000546803 SPAARA0A1B0GVQ0 90 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 EFCAB8A8MWE9 144 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 CFAP99D6REC4 459 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 GOLGA8MH3BSY2 632 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 KMOO15229 486 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 AVILO75366 819 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 CKMT1AP12532 417 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 AKT1P31749 480 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 CA5AP35218 305 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 CLCNKAP51800 687 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 LYPLAL1Q5VWZ2 237 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 OGFOD3Q6PK18 319 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 NRROSQ86YC3 692 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 MNS1Q8NEH6 495 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 OR6P1Q8NGX9 317 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 CCL4L1Q8NHW4 92 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 TTC1Q99614 292 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 COPS8Q99627 209 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 TREX1Q9NSU2 369 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 ZDHHC3Q9NYG2 299 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 SAMD15Q9P1V8 674 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 GPR34Q9UPC5 381 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 APOBEC2Q9Y235 224 aaKnown RBP16.6■□□□□ 0.25
CCDC38-203ENST00000546803 PCDHGA1Q9Y5H4 931 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 MRFAP1Q9Y605 127 aa16.6■□□□□ 0.25
CCDC38-203ENST00000546803 DNMT3AQ9Y6K1 912 aaPredicted RBP16.6■□□□□ 0.25
CCDC38-203ENST00000546803 IGLV3-16A0A075B6K0 115 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 RAD51CO43502 376 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 KCNJ13O60928 360 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 SEC31AO94979 1220 aaKnown RBP16.59■□□□□ 0.25
CCDC38-203ENST00000546803 GOT2P00505 430 aaKnown RBP16.59■□□□□ 0.25
CCDC38-203ENST00000546803 CDK4P11802 303 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 PAMP19021 973 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 KCNA4P22459 653 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 ACP1P24666 158 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 ACRV1P26436 265 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 AK4P27144 223 aaPredicted RBP16.59■□□□□ 0.25
CCDC38-203ENST00000546803 FOXN2P32314 431 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 ACTR1BP42025 376 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 ACTR1AP61163 376 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 DAB2P98082 770 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 ILKQ13418 452 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 NR0B2Q15466 257 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 TCEA2Q15560 299 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 DNAJC21Q5F1R6 531 aaKnown RBP16.59■□□□□ 0.25
CCDC38-203ENST00000546803 HIBCHQ6NVY1 386 aaPredicted RBP16.59■□□□□ 0.25
CCDC38-203ENST00000546803 CASC4Q6P4E1 433 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 CERS6Q6ZMG9 384 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 CHST15Q7LFX5 561 aaPredicted RBP16.59■□□□□ 0.25
CCDC38-203ENST00000546803 TAS2R42Q7RTR8 314 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 SERPINA9Q86WD7 417 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 TRAPPC5Q8IUR0 188 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 ARL10Q8N8L6 244 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 RASGEF1AQ8N9B8 481 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 OR4L1Q8NH43 312 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 ERP44Q9BS26 406 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 TIMM29Q9BSF4 260 aa16.59■□□□□ 0.25
CCDC38-203ENST00000546803 DPEP2Q9H4A9 486 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms