RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.77□□□□□ -1.32
LDHA-223ENST00000545215 COPG1Q9Y678 874 aaKnown RBP6.77□□□□□ -1.32
LDHA-223ENST00000545215 ZGRF1Q86YA3 2104 aa6.77□□□□□ -1.33
LDHA-223ENST00000545215 ITIH6Q6UXX5 1313 aa6.77□□□□□ -1.33
LDHA-223ENST00000545215 GOLGA6L6A8MZA4 724 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 SCDO00767 359 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 MID1O15344 667 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 KDM1AO60341 852 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 TACC1O75410 805 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 VNN1O95497 513 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 FUCA1P04066 466 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 CSF2P04141 144 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 CCDC172P0C7W6 258 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 WARSP23381 471 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 CD40P25942 277 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 MAT2AP31153 395 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 GNL1P36915 607 aaPredicted RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 MYL6P60660 151 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 NOP14P78316 857 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 FOLH1Q04609 750 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 ERV3-1Q14264 604 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 ZNF235Q14590 738 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 WDR72Q3MJ13 1102 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 POM121L1PQ3SYA9 428 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 MDH1BQ5I0G3 518 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 SPECC1LQ69YQ0 1117 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 HMBOX1Q6NT76 420 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 TRIM65Q6PJ69 517 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 DENND5BQ6ZUT9 1274 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 LIMS2Q7Z4I7 341 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 TMEM135Q86UB9 458 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 UNC93AQ86WB7 457 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 ZZZ3Q8IYH5 903 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 ZNF397Q8NF99 534 aaPredicted RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 NEK11Q8NG66 645 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 KBTBD7Q8WVZ9 684 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 PCED1BQ96HM7 432 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 TEKT5Q96M29 485 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 ALPK1Q96QP1 1244 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 CALN1Q9BXU9 219 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 CPEB1Q9BZB8 566 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 PLA2G12AQ9BZM1 189 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 CD244Q9BZW8 370 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 TSPYL1Q9H0U9 437 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 XYLT2Q9H1B5 865 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 MMRN2Q9H8L6 949 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 SP110Q9HB58 689 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 EHD2Q9NZN4 543 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 AKAP7Q9P0M2 348 aaPredicted RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 IFNKQ9P0W0 207 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 FBLN5Q9UBX5 448 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 PLA2G4CQ9UP65 541 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 MRPS18BQ9Y676 258 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 RNF215Q9Y6U7 377 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 RYR3Q15413 4870 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 A0A1W2PQJ5 194 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 A8MXQ7 604 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 F8VP50 259 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 CRLF1O75462 422 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 IL33O95760 270 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 PENKP01210 267 aaPredicted RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 IGLV1-40P01703 118 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 UCHL3P15374 230 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 GOT1P17174 413 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 PTPN1P18031 435 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 PON1P27169 355 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 STAT1P42224 750 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 GATA4P43694 442 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 BPIFB4P59827 614 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 CUL2Q13617 745 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 GRM3Q14832 879 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 BRD3Q15059 726 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 SYCP1Q15431 976 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 CST6Q15828 149 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 PODNL1Q6PEZ8 512 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 RHOT1Q8IXI2 618 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 SLC22A18ASQ8N1D0 253 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 WFDC11Q8NEX6 87 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 LMO3Q8TAP4 145 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 MYCBPAPQ8TBZ2 947 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 ASB11Q8WXH4 323 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 TNIP3Q96KP6 325 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 C16orf92Q96LL3 132 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 MRPL45Q9BRJ2 306 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 STK33Q9BYT3 514 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 XPO4Q9C0E2 1151 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 ENKD1Q9H0I2 346 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 GRPEL1Q9HAV7 217 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 RCOR3Q9P2K3 495 aaPredicted RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 ZC3H7BQ9UGR2 993 aaKnown RBP6.76□□□□□ -1.33
LDHA-223ENST00000545215 SUN2Q9UH99 717 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 KIAA1257Q9ULG3 409 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 SIK3Q9Y2K2 1263 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 ATP23Q9Y6H3 246 aa6.76□□□□□ -1.33
LDHA-223ENST00000545215 KMT2CQ8NEZ4 4911 aaKnown RBP6.75□□□□□ -1.33
LDHA-223ENST00000545215 A6NCN8 305 aa6.75□□□□□ -1.33
LDHA-223ENST00000545215 CLDN5O00501 218 aa6.75□□□□□ -1.33
LDHA-223ENST00000545215 KRIT1O00522 736 aa6.75□□□□□ -1.33
LDHA-223ENST00000545215 INPP4BO15327 924 aa6.75□□□□□ -1.33
LDHA-223ENST00000545215 GSC2O15499 205 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms