RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PMPCBO75439 489 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 GCATO75600 419 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 ANXA9O76027 345 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 EPOP01588 193 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 GP1BAP07359 652 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 RBL1P28749 1068 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 CD68P34810 354 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-224ENST00000544990 SPINT3P49223 89 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 GEMP55040 296 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 CDK3Q00526 305 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 MPP3Q13368 585 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PEX6Q13608 980 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PRPSAP1Q14558 356 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PTPRRQ15256 657 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 NR0B2Q15466 257 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 SMAD1Q15797 465 aaKnown RBP7.33□□□□□ -1.24
CPSF7-224ENST00000544990 SEL1L2Q5TEA6 688 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 UNQ6494/PRO21346Q6UXR6 183 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 ADAMTSL4Q6UY14 1074 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 CCNI2Q6ZMN8 369 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-224ENST00000544990 ZNF662Q6ZS27 426 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 TAF8Q7Z7C8 310 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 ZNF567Q8N184 647 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PELI3Q8N2H9 469 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 SPATA22Q8NHS9 363 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 OR1E3Q8WZA6 343 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 ALG3Q92685 438 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 NAT6Q93015 286 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 SCAMP4Q969E2 229 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 TADA1Q96BN2 335 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 LRRC45Q96CN5 670 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PDXPQ96GD0 296 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 HES6Q96HZ4 224 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 HIC2Q96JB3 615 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PPP1R2P1Q96PQ5 205 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 ALS2CR12Q96Q35 445 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 SMIM14Q96QK8 99 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 TRIB3Q96RU7 358 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 MDFIQ99750 246 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 RIOK2Q9BVS4 552 aaKnown RBP7.33□□□□□ -1.24
CPSF7-224ENST00000544990 LGR4Q9BXB1 951 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 FSD1LQ9BXM9 530 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 GPR63Q9BZJ6 419 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 CLPBQ9H078 707 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 CDH19Q9H159 772 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 ABCG4Q9H172 646 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 FAM83DQ9H4H8 585 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 TRABDQ9H4I3 376 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 GRPEL1Q9HAV7 217 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 UBP1Q9NZI7 540 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 RSPH14Q9UHP6 348 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PNMA8BQ9ULN7 279 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-224ENST00000544990 SOX13Q9UN79 622 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PACSIN2Q9UNF0 486 aaPredicted RBP7.33□□□□□ -1.24
CPSF7-224ENST00000544990 PCDHGB7Q9Y5F8 929 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 CAPN6Q9Y6Q1 641 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 MYLKQ15746 1914 aa7.33□□□□□ -1.24
CPSF7-224ENST00000544990 A0A0U1RQS6 177 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 LOC285095A0A1B0GVY8 99 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 EME2A4GXA9 379 aaPredicted RBP7.32□□□□□ -1.24
CPSF7-224ENST00000544990 DDX3YO15523 660 aaKnown RBP7.32□□□□□ -1.24
CPSF7-224ENST00000544990 KCNN4O15554 427 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ASMTLO95671 621 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 CEACAM5P06731 702 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 PROS1P07225 676 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 HLA-DPA1P20036 260 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 WNT3AP56704 352 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ILF3Q12906 894 aaKnown RBP eCLIP7.32□□□□□ -1.242e-6■■■■□ 21.5
CPSF7-224ENST00000544990 RPS6KA1Q15418 735 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 CDKN3Q16667 212 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ANKRD20A2Q5SQ80 823 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 FAM182AQ5T1J6 154 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 HES3Q5TGS1 186 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ANKRD20A1Q5TYW2 823 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ANKRD20A3Q5VUR7 823 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 AADACL2Q6P093 401 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 RFLNAQ6ZTI6 216 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 TMC3Q7Z5M5 1100 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ARL10Q8N8L6 244 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 FAM46DQ8NEK8 389 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 OR6C4Q8NGE1 309 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 IFI44Q8TCB0 444 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ANP32BQ92688 251 aaKnown RBP7.32□□□□□ -1.24
CPSF7-224ENST00000544990 GATA6Q92908 595 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 TMEM74Q96NL1 305 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 HERPUD2Q9BSE4 406 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ZSCAN5AQ9BUG6 496 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 BOCQ9BWV1 1114 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 SPATA16Q9BXB7 569 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 GSDMCQ9BYG8 508 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 FRMD8Q9BZ67 464 aaPredicted RBP7.32□□□□□ -1.24
CPSF7-224ENST00000544990 TMEM168Q9H0V1 697 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 GBA3Q9H227 469 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 ACBD3Q9H3P7 528 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 CAAP1Q9H8G2 361 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 CARS2Q9HA77 564 aaKnown RBP7.32□□□□□ -1.24
CPSF7-224ENST00000544990 FGF22Q9HCT0 170 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 LZTFL1Q9NQ48 299 aa7.32□□□□□ -1.24
CPSF7-224ENST00000544990 MRPL40Q9NQ50 206 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms