RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 CTAGE15A4D2H0 777 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 NPIPB15A6NHN6 443 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 K7ENP7 123 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 PSMD3O43242 534 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 RAD51CO43502 376 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 NOBOXO60393 691 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 RECQL5O94762 991 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 AP2A1O95782 977 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 RPLP0P05388 317 aaKnown RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 APRTP07741 180 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 CYP2A6P11509 494 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 CTSEP14091 401 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 VIPR1P32241 457 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 GRIA1P42261 906 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 TNNT3P45378 269 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 RPL26P61254 145 aaKnown RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 CCL7P80098 99 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 DHX34Q14147 1143 aaKnown RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 SLC1A5Q15758 541 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 DENND2CQ68D51 928 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 INO80CQ6PI98 192 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 FOXR1Q6PIV2 292 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 RANBP10Q6VN20 620 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 LIPIQ6XZB0 460 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 USP45Q70EL2 814 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 DPPA4Q7L190 304 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 RD3Q7Z3Z2 195 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 TSPAN33Q86UF1 283 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 CTAGE6Q86UF2 777 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 GKN2Q86XP6 184 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 NDUFAF2Q8N183 169 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 ARL14Q8N4G2 192 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 SCRN2Q96FV2 425 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 WBP1Q96G27 269 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 CARD6Q9BX69 1037 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 FOXP3Q9BZS1 431 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 LRRC40Q9H9A6 602 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 MRPL40Q9NQ50 206 aaKnown RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 ASIC3Q9UHC3 531 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 RPL26L1Q9UNX3 145 aaKnown RBP12.39□□□□□ -0.43
ACTN1-206ENST00000544964 DOLKQ9UPQ8 538 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 PPIL1Q9Y3C6 166 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 SPO11Q9Y5K1 396 aa12.39□□□□□ -0.43
ACTN1-206ENST00000544964 SDK2Q58EX2 2172 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-206ENST00000544964 TCRBV7S3A2A0A539 114 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 CAPN8A6NHC0 703 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 PLD2O14939 933 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 EPOP01588 193 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 ELFN1P0C7U0 828 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 HGFP14210 728 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 TPH1P17752 444 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 HLA-DPA1P20036 260 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 LHCGRP22888 699 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 CCKBRP32239 447 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 TRIM23P36406 574 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 ADCY8P40145 1251 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 CNGA3Q16281 694 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 TAF1BQ53T94 588 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-206ENST00000544964 CERCAMQ5T4B2 595 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 ANKRD22Q5VYY1 191 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 DENND5AQ6IQ26 1287 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 CCNJLQ8IV13 435 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 MNS1Q8NEH6 495 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 OR56A4Q8NGH8 313 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 OR52K1Q8NGK4 314 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 SCG3Q8WXD2 468 aaKnown RBP12.38□□□□□ -0.43
ACTN1-206ENST00000544964 LRRC45Q96CN5 670 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 GFM1Q96RP9 751 aaKnown RBP12.38□□□□□ -0.43
ACTN1-206ENST00000544964 MCCC1Q96RQ3 725 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-206ENST00000544964 LGR4Q9BXB1 951 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 TRIM31Q9BZY9 425 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 EPB41L5Q9HCM4 733 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 ACSL6Q9UKU0 697 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 SHOC2Q9UQ13 582 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 PCDHGA7Q9Y5G6 932 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 PTPN13Q12923 2485 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
ACTN1-206ENST00000544964 ERI2A8K979 691 aaKnown RBP12.37□□□□□ -0.43
ACTN1-206ENST00000544964 HEXIM1O94992 359 aaKnown RBP12.37□□□□□ -0.43
ACTN1-206ENST00000544964 CLDN7O95471 211 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 SLC4A1P02730 911 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 FGF1P05230 155 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 NFKBIAP25963 317 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 UGT1A5P35504 534 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 INHBCP55103 352 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 EIF3IQ13347 325 aaKnown RBP12.37□□□□□ -0.43
ACTN1-206ENST00000544964 LY6DQ14210 128 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 HLTFQ14527 1009 aaKnown RBP eCLIP12.37□□□□□ -0.43
ACTN1-206ENST00000544964 KCNJ11Q14654 390 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 KIAA1614Q5VZ46 1190 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 IZUMO3Q5VZ72 239 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 LRRC66Q68CR7 880 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 PPP1R21Q6ZMI0 780 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 SYDE1Q6ZW31 735 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-206ENST00000544964 RAB11FIP2Q7L804 512 aa12.37□□□□□ -0.43
ACTN1-206ENST00000544964 TMPRSS9Q7Z410 1059 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms