RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	SAT2	Q96F10	170 aa	Predicted RBP	4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	CALML4	Q96GE6	196 aa		4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	QRFPR	Q96P65	431 aa		4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	DUX5	Q96PT3	197 aa		4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	NUDCD1	Q96RS6	583 aa		4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	C1QTNF4	Q9BXJ3	329 aa		4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	TMEM39B	Q9GZU3	492 aa		4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	SEC63	Q9UGP8	760 aa	Known RBP	4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	PADI1	Q9ULC6	663 aa		4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	EXO1	Q9UQ84	846 aa	Known RBP	4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	PCDHGB1	Q9Y5G3	927 aa		4.14	□□□□□ -1.75
RAP1B-231	ENST00000544639	SAA2-SAA4	A0A096LPE2	208 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	TMEM8B	A6NDV4	472 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	HNRNPCL2	B2RXH8	293 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	ACOT8	O14734	319 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	SLC16A5	O15375	505 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	PAPSS1	O43252	624 aa	Predicted RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	HLA-DOB	P13765	273 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	MYOD1	P15172	320 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	ACTN2	P35609	894 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	MRPS5	P82675	430 aa	Known RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	REL	Q04864	619 aa	Predicted RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	COASY	Q13057	564 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	ZBTB17	Q13105	803 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	TRNP1	Q6NT89	227 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	CCDC190	Q86UF4	302 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	SCYL3	Q8IZE3	742 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	LNX1	Q8TBB1	728 aa	Predicted RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	SLC38A5	Q8WUX1	472 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	SLC44A1	Q8WWI5	657 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	DNAAF4	Q8WXU2	420 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	PIGT	Q969N2	578 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	LRRC59	Q96AG4	307 aa	Known RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	IGSF21	Q96ID5	467 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	FAM84B	Q96KN1	310 aa	Predicted RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	CSTL1	Q9H114	145 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	HRH4	Q9H3N8	390 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	TRMT1	Q9NXH9	659 aa	Known RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	WSB2	Q9NYS7	404 aa	Predicted RBP	4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	SWAP70	Q9UH65	585 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	PCDHGB4	Q9UN71	923 aa		4.13	□□□□□ -1.75
RAP1B-231	ENST00000544639	IGHV4OR15-8	A0A075B7B6	117 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	OR2A25	A4D2G3	310 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	SMTNL1	A8MU46	457 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	CTDSP2	O14595	271 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	PLPP2	O43688	288 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	TMCC2	O75069	709 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	CAMTA2	O94983	1202 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	PGM3	O95394	542 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	SELL	P14151	372 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	ITGA2	P17301	1181 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	USP8	P40818	1118 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	MMP14	P50281	582 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	PSMC6	P62333	389 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	RUNX1T1	Q06455	604 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	KCNC3	Q14003	757 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	MVP	Q14764	893 aa	Known RBP	4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	SYT16	Q17RD7	645 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	UNQ6126/PRO20091	Q6UXV3	157 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	SFR1	Q86XK3	245 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	MCEMP1	Q8IX19	187 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	PM20D2	Q8IYS1	436 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	TAGAP	Q8N103	731 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	TMTC2	Q8N394	836 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	IL17RC	Q8NAC3	791 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	BBS10	Q8TAM1	723 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	UTP15	Q8TED0	518 aa	Known RBP	4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	CDCA5	Q96FF9	252 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	DACH2	Q96NX9	599 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	IL17F	Q96PD4	163 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	SMC6	Q96SB8	1091 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	GFI1	Q99684	422 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	SEMA3C	Q99985	751 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	UBTD1	Q9HAC8	227 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	KLHL1	Q9NR64	748 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	DBNL	Q9UJU6	430 aa	Known RBP	4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	TMEM5	Q9Y2B1	443 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	OR2W1	Q9Y3N9	320 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639	CGNL1	Q0VF96	1302 aa		4.12	□□□□□ -1.75
RAP1B-231	ENST00000544639		A0A1B0GUV1	79 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	LNP1	A1A4G5	178 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	LRRC72	A6NJI9	287 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	TULP2	O00295	520 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	CLGN	O14967	610 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	LDB3	O75112	727 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	ENTPD3	O75355	529 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	ZNF217	O75362	1048 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	SNRNP70	P08621	437 aa	Known RBP	4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	TGFB3	P10600	412 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	MMP9	P14780	707 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	KCNA5	P22460	613 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	HRH2	P25021	359 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	GNL1	P36915	607 aa	Predicted RBP	4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	NRIP1	P48552	1158 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	SUOX	P51687	545 aa		4.11	□□□□□ -1.75
RAP1B-231	ENST00000544639	PNLIPRP2	P54317	469 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms