RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ANGPT2O15123 496 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 TBC1D4O60343 1298 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 HUS1O60921 280 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 CNOT3O75175 753 aaKnown RBP10.34□□□□□ -0.75
CHFR-219ENST00000541341 OAZ2O95190 189 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 FKBP9O95302 570 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 PAPLNO95428 1278 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 MATN4O95460 622 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 SEC24AO95486 1093 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 LRG1P02750 347 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 PDGFRBP09619 1106 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 WARSP23381 471 aaKnown RBP10.34□□□□□ -0.75
CHFR-219ENST00000541341 EPHA3P29320 983 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 GEMP55040 296 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 PKNOX1P55347 436 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 OXCT1P55809 520 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 CDKL1Q00532 357 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 MS4A2Q01362 244 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 PRKCQQ04759 706 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 SCAPQ12770 1279 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 ACAP2Q15057 778 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 TRIM16LQ309B1 348 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
CHFR-219ENST00000541341 REP15Q6BDI9 236 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 ZNF773Q6PK81 442 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 DCDC5Q6ZRR9 648 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 SPATA19Q7Z5L4 167 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 SPRED1Q7Z699 444 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 ZC3HC1Q86WB0 502 aaKnown RBP10.34□□□□□ -0.75
CHFR-219ENST00000541341 KLHDC8BQ8IXV7 354 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 ZNF786Q8N393 782 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 KDM1BQ8NB78 822 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 PAPD5Q8NDF8 572 aaKnown RBP10.34□□□□□ -0.75
CHFR-219ENST00000541341 TRPV3Q8NET8 790 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 APPL2Q8NEU8 664 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 UBA3Q8TBC4 463 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 RNF139Q8WU17 664 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 ELMO3Q96BJ8 720 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 ZSWIM3Q96MP5 696 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 TSGA13Q96PP4 275 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 MCMBPQ9BTE3 642 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 OXCT2Q9BYC2 517 aaPredicted RBP10.34□□□□□ -0.75
CHFR-219ENST00000541341 SHCBP1LQ9BZQ2 653 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 MOV10Q9HCE1 1003 aaKnown RBP10.34□□□□□ -0.75
CHFR-219ENST00000541341 HPS4Q9NQG7 708 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 ABCD2Q9UBJ2 740 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 SLC39A10Q9ULF5 831 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 ERGIC3Q9Y282 383 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 GPC6Q9Y625 555 aaPredicted RBP10.34□□□□□ -0.75
CHFR-219ENST00000541341 USP3Q9Y6I4 520 aa10.34□□□□□ -0.75
CHFR-219ENST00000541341 SDHDO14521 159 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 NEMP1O14524 444 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 CLPXO76031 633 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 IPO13O94829 963 aaKnown RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 CPNE6O95741 557 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 LDLRP01130 860 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 ALBP02768 609 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 FGF4P08620 206 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 PTPN2P17706 415 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 JAK1P23458 1154 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 MPSTP25325 297 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 PSMB4P28070 264 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 PCSK6P29122 969 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 HOXC13P31276 330 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 GRK3P35626 688 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 VIPR2P41587 438 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 CCR2P41597 374 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 LHX1P48742 406 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 EEFSECP57772 596 aaKnown RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 PLOD1Q02809 727 aaPredicted RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 MTAPQ13126 283 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 IL18R1Q13478 541 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 MTM1Q13496 603 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 ATP6AP1Q15904 470 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 INAQ16352 499 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 NRF1Q16656 503 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 RFX4Q33E94 735 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 AGKQ53H12 422 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 PPM1JQ5JR12 505 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 C8orf82Q6P1X6 216 aaPredicted RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 PKN3Q6P5Z2 889 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 CYP2U1Q7Z449 544 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 GALNT13Q8IUC8 556 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 CLYBLQ8N0X4 340 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 ZNF567Q8N184 647 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 FSTL5Q8N475 847 aaPredicted RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 MAPK15Q8TD08 544 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 LRTOMTQ8WZ04 291 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 KCTD13Q8WZ19 329 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 AURKBQ96GD4 344 aaPredicted RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 KLHL32Q96NJ5 620 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 KCTD15Q96SI1 283 aaPredicted RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 GPATCH1Q9BRR8 931 aaKnown RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 NPLQ9BXD5 320 aaPredicted RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 WDR55Q9H6Y2 383 aaPredicted RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 NOL11Q9H8H0 719 aaKnown RBP10.33□□□□□ -0.76
CHFR-219ENST00000541341 BRD9Q9H8M2 597 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 PARVBQ9HBI1 364 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 AGPAT4Q9NRZ5 378 aa10.33□□□□□ -0.76
CHFR-219ENST00000541341 CNOT6Q9ULM6 557 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms