RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 TRAF7Q6Q0C0 670 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 POTEHQ6S545 545 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 UNC5AQ6ZN44 842 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 KIAA0408Q6ZU52 694 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 SZRD1Q7Z422 152 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 ADGRG6Q86SQ4 1221 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 RNF180Q86T96 592 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 HIPK1Q86Z02 1210 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 SLC9A9Q8IVB4 645 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 DHX40Q8IX18 779 aaKnown RBP6.15□□□□□ -1.42
LMO3-225ENST00000541295 TUSC5Q8IXB3 177 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 THNSL1Q8IYQ7 743 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 ADGRG2Q8IZP9 1017 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 GALNT4Q8N4A0 578 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 C12orf29Q8N999 325 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 ATG16L2Q8NAA4 619 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 OR2L3Q8NG85 312 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 NAPGQ99747 312 aaPredicted RBP6.15□□□□□ -1.42
LMO3-225ENST00000541295 ALX4Q9H161 411 aaPredicted RBP6.15□□□□□ -1.42
LMO3-225ENST00000541295 IKZF4Q9H2S9 585 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 Q9H521 79 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 CATSPERBQ9H7T0 1116 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 NMUR1Q9HB89 426 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 MLXIPLQ9NP71 852 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 GPN3Q9UHW5 284 aaPredicted RBP6.15□□□□□ -1.42
LMO3-225ENST00000541295 APPL1Q9UKG1 709 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 GJD2Q9UKL4 321 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 MAN1B1Q9UKM7 699 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 AGO1Q9UL18 857 aaKnown RBP6.15□□□□□ -1.42
LMO3-225ENST00000541295 PCDHB10Q9UN67 800 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 TBC1D30Q9Y2I9 924 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 PCDHB9Q9Y5E1 797 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 SPACA6W5XKT8 324 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 ZNF541Q9H0D2 1346 aa6.15□□□□□ -1.42
LMO3-225ENST00000541295 H7BY64 318 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 DVL2O14641 736 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 EIF3DO15371 548 aaKnown RBP eCLIP6.15□□□□□ -1.43
LMO3-225ENST00000541295 NOL4O94818 638 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 SNHG28P0DPA3 235 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 PFKLP17858 780 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 TGM1P22735 817 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 RBL1P28749 1068 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 HOXA13P31271 388 aaPredicted RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 KIR3DL2P43630 455 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 SLC1A6P48664 564 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 ARSEP51690 589 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 CEBPGP53567 150 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 REEP5Q00765 189 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 KRR1Q13601 381 aaKnown RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 KRT31Q15323 416 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 DGKDQ16760 1214 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 PCGF3Q3KNV8 242 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 ZIK1Q3SY52 487 aaPredicted RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 PPM1LQ5SGD2 360 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 HP1BP3Q5SSJ5 553 aaPredicted RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 AGAP7PQ5VUJ5 663 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 UBE2UQ5VVX9 321 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 IQCHQ86VS3 1027 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 TDRPQ86YL5 185 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 SIAH1Q8IUQ4 282 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 CCDC105Q8IYK2 499 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 PRSS58Q8IYP2 241 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 DCAF4Q8WV16 495 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 ERLEC1Q96DZ1 483 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 PHF21BQ96EK2 531 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 FAM71F1Q96KD3 344 aaPredicted RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 P2RX7Q99572 595 aaKnown RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 ARHGEF4Q9NR80 690 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 AAASQ9NRG9 546 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 SACM1LQ9NTJ5 587 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 ARL8BQ9NVJ2 186 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 DDX43Q9NXZ2 648 aaKnown RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 RAB23Q9ULC3 237 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 PLLPQ9Y342 182 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 SNX24Q9Y343 169 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 ASB4Q9Y574 426 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 MAU2Q9Y6X3 613 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 CNTNAP1P78357 1384 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 BLACEA4D250 179 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 ADRB2P07550 413 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 IFI30P13284 250 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 OGNP20774 298 aaKnown RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 NR2F2P24468 414 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 PCSK1P29120 753 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 DGKZQ13574 1117 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 THOC5Q13769 683 aaKnown RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 FGL2Q14314 439 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 MTF1Q14872 753 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 ZNHIT3Q15649 155 aaPredicted RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 CALCRLQ16602 461 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.15□□□□□ -1.43
LMO3-225ENST00000541295 CCNI2Q6ZMN8 369 aaPredicted RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 TRMT11Q7Z4G4 463 aaKnown RBP6.15□□□□□ -1.43
LMO3-225ENST00000541295 C12orf40Q86WS4 652 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 CTAGE3PQ8IX95 158 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 PHTF2Q8N3S3 785 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 METTL25Q8N6Q8 603 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 KDM1BQ8NB78 822 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 FIG4Q92562 907 aa6.15□□□□□ -1.43
LMO3-225ENST00000541295 HTRA1Q92743 480 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms