RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 SLC38A3Q99624 504 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 SPATA16Q9BXB7 569 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 EPB41L1Q9H4G0 881 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 FAM153AQ9UHL3 310 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 SHOC2Q9UQ13 582 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 EFR3BQ9Y2G0 817 aa12.95□□□□□ -0.34
SEMA4D-223ENST00000540475 PIRTP0C851 137 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 ACP5P13686 325 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 MAPK10P53779 464 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 COPS2P61201 443 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 BIRC2Q13490 618 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 PCSK7Q16549 785 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 CCDC70Q6NSX1 233 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 ABRAXAS1Q6UWZ7 409 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 WASH2PQ6VEQ5 465 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 BBS12Q6ZW61 710 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 KDELC2Q7Z4H8 507 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 C11orf96Q7Z7L8 435 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC9B2Q86UD5 537 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 ZFAND4Q86XD8 727 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF547Q8IVP9 402 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF567Q8N184 647 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 TTC30BQ8N4P2 665 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 HTR3CQ8WXA8 447 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 SGF29Q96ES7 293 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 TIMM29Q9BSF4 260 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 GPR63Q9BZJ6 419 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 TRIM5Q9C035 493 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 OR2AG1Q9H205 316 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 GOLPH3Q9H4A6 298 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 WASH6PQ9NQA3 447 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 IL17CQ9P0M4 197 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 TMEM9Q9P0T7 183 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 SEPT10Q9P0V9 454 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 CPNE7Q9UBL6 633 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC23A2Q9UGH3 650 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 TRHDEQ9UKU6 1024 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 KCNK6Q9Y257 313 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF462Q96JM2 2506 aa12.94□□□□□ -0.34
SEMA4D-223ENST00000540475 TENM4Q6N022 2769 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 TRBV23OR9-2A0A075B6M9 112 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 LILRA5A6NI73 299 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 BTNL10A8MVZ5 291 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 STMND1H3BQB6 276 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 KMOO15229 486 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 DUX1O43812 170 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 KCNJ13O60928 360 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 PMPCBO75439 489 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 ITGB2P05107 769 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 TNNT1P13805 278 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 NFKB1P19838 968 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 CSTF2P33240 577 aaKnown RBP eCLIP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 PTPN7P35236 360 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 MARCKSL1P49006 195 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 WNT3AP56704 352 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 MC2RQ01718 297 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 SRSF6Q13247 344 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 MPP3Q13368 585 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 KHDC1Q4VXA5 237 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 TAF1BQ53T94 588 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 SIRPB2Q5JXA9 342 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF648Q5T619 568 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 AGAP9Q5VTM2 703 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 ZDHHC20Q5W0Z9 365 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 PHYKPLQ8IUZ5 450 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 KRT35Q92764 455 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 NKD1Q969G9 470 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 PMEPA1Q969W9 287 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 MED8Q96G25 268 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 OXNAD1Q96HP4 312 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 MRFAP1L1Q96HT8 127 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 RBM41Q96IZ5 413 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 QKIQ96PU8 341 aaKnown RBP eCLIP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 ASPSCR1Q9BZE9 553 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 SEMA4CQ9C0C4 833 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 STN1Q9H668 368 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 IL26Q9NPH9 171 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 PRDM8Q9NQV8 689 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 FBXO8Q9NRD0 319 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 OCIAD1Q9NX40 245 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 UBP1Q9NZI7 540 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 HACD3Q9P035 362 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 PCDHB11Q9Y5F2 797 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 PCDHA3Q9Y5H8 950 aa12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-223ENST00000540475 MN1Q10571 1320 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 APOC4-APOC2K7ER74 178 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 PPFIA2O75334 1257 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 APOC2P02655 101 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 C9P02748 559 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 ANKRD34CP0C6C1 535 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF7P17097 686 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 WT1P19544 449 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms