RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 DPP10Q8N608 796 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PDPRQ8NCN5 879 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 DDHD1Q8NEL9 900 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TANKQ92844 425 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ACDQ96AP0 544 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ISG20Q96AZ6 181 aaKnown RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 MS4A4AQ96JQ5 239 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 RPL10LQ96L21 214 aaKnown RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 TMEM74Q96NL1 305 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 KATNAL1Q9BW62 490 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 SOX17Q9H6I2 414 aaPredicted RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 NTN4Q9HB63 628 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PALMDQ9NP74 551 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 RNF112Q9ULX5 631 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TIMM22Q9Y584 194 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PCDHB3Q9Y5E6 796 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PCDHGA11Q9Y5H2 935 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TRPV2Q9Y5S1 764 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ARL5AQ9Y689 179 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TTC3P53804 2025 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 IGLV3-10A0A075B6K4 115 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 SOBPA7XYQ1 873 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 SYCE1LA8MT33 242 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 SNX2O60749 519 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 ECI2O75521 394 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 CHEK2O96017 543 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 ZNF865P0CJ78 1059 aaPredicted RBP9.59□□□□□ -0.87
CDH13-204ENST00000539548 CDH1P12830 882 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 CCNA2P20248 432 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 UGT1A1P22309 533 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 UGT1A4P22310 534 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 UGT1A3P35503 534 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 UGT1A5P35504 534 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 POLR2IP36954 125 aaKnown RBP9.59□□□□□ -0.87
CDH13-204ENST00000539548 MAGEA8P43361 318 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 BMXP51813 675 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 TBX4P57082 545 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 ERVK-8P63133 956 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 RAD51Q06609 339 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 NFATC3Q12968 1075 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 NEDD8Q15843 81 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 ALFQ53S48 1182 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 MS4A13Q5J8X5 152 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 GLYATQ6IB77 296 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 PAQR3Q6TCH7 311 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 SYVN1Q86TM6 617 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 MON1AQ86VX9 555 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 ZBTB8BQ8NAP8 495 aaPredicted RBP9.59□□□□□ -0.87
CDH13-204ENST00000539548 ZC3H15Q8WU90 426 aaKnown RBP9.59□□□□□ -0.87
CDH13-204ENST00000539548 RSPH1Q8WYR4 309 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 RNF145Q96MT1 663 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 MUS81Q96NY9 551 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 SEPHS2Q99611 448 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 SEMA3CQ99985 751 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 LRRC3Q9BY71 257 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 ZFYVE28Q9HCC9 887 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 TAS2R13Q9NYV9 303 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 SLAMF8Q9P0V8 285 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 SUN2Q9UH99 717 aa9.59□□□□□ -0.87
CDH13-204ENST00000539548 TDRD15B5MCY1 1934 aaKnown RBP9.59□□□□□ -0.87
CDH13-204ENST00000539548 CCL15-CCL14A0A0B4J2E2 113 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 M0QZ92 97 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 UPK1AO00322 258 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 TULP3O75386 442 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 SOAT2O75908 522 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 RHOBTB1O94844 696 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 ZBTB11O95625 1053 aaPredicted RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 MLYCDO95822 493 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 C1RP00736 705 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 MATN1P21941 496 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 TPP2P29144 1249 aaPredicted RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 YAP1P46937 504 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 ALDH3A2P51648 485 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 OR4D2P58180 307 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 PHEXP78562 749 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 BEX3Q00994 111 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 BNIP3Q12983 259 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 TGFBIQ15582 683 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 CCL15Q16663 113 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 PAN2Q504Q3 1202 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 SLC44A4Q53GD3 710 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 BROXQ5VW32 411 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 TXNDC11Q6PKC3 985 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 DCDC5Q6ZRR9 648 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 OR13C4Q8NGS5 318 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 BLOC1S5Q8TDH9 187 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 TRUB1Q8WWH5 349 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 CDKN2AIPNLQ96HQ2 116 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 NSMCE2Q96MF7 247 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 C1orf50Q9BV19 199 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 TDRD1Q9BXT4 1180 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 AP5M1Q9H0R1 490 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 GPN2Q9H9Y4 310 aaPredicted RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 INTS7Q9NVH2 962 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 RIC8BQ9NVN3 520 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 MAGEL2Q9UJ55 1249 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 GNPTGQ9UJJ9 305 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 ZNF225Q9UK10 706 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 PCTPQ9UKL6 214 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 IKZF3Q9UKT9 509 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms