RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 UGT1A8Q9HAW9 530 aa15.47■□□□□ 0.07
CIT-210ENST00000539413 EPB41L5Q9HCM4 733 aa15.47■□□□□ 0.07
CIT-210ENST00000539413 SLC23A2Q9UGH3 650 aa15.47■□□□□ 0.07
CIT-210ENST00000539413 PPP2R2CQ9Y2T4 447 aa15.47■□□□□ 0.07
CIT-210ENST00000539413 ZZEF1O43149 2961 aa15.47■□□□□ 0.07
CIT-210ENST00000539413 CCDC187A0A096LP49 1063 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 A6NCN8 305 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 C2orf81A6NN90 581 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 VEGFDO43915 354 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 PPFIA2O75334 1257 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 DXOO77932 396 aaKnown RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 CDK14O94921 469 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 LPOP22079 712 aaPredicted RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 ACTN2P35609 894 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 EIF2S3P41091 472 aaKnown RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 TMEM115Q12893 351 aaPredicted RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 OASLQ15646 514 aaKnown RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 AMZ1Q400G9 498 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 C19orf48Q6RUI8 117 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 LRRTM4Q86VH4 590 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 ZNF761Q86XN6 746 aaPredicted RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 ZNF547Q8IVP9 402 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 LSMEM2Q8N112 164 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 SFRP1Q8N474 314 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 OR4K2Q8NGD2 314 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 WDR36Q8NI36 951 aaKnown RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 SNIP1Q8TAD8 396 aaKnown RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 BRSK1Q8TDC3 778 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 HNRNPLLQ8WVV9 542 aaKnown RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 C1orf54Q8WWF1 131 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 FGF11Q92914 225 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 RTP4Q96DX8 246 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 LIN37Q96GY3 246 aaPredicted RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 PRR11Q96HE9 360 aaPredicted RBP15.46■□□□□ 0.07
CIT-210ENST00000539413 RDH14Q9HBH5 336 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 ARNT2Q9HBZ2 717 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 ASCL3Q9NQ33 180 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 KLC4Q9NSK0 619 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.46■□□□□ 0.07
CIT-210ENST00000539413 FKBPLQ9UIM3 349 aa15.46■□□□□ 0.07
CIT-210ENST00000539413 BPTFQ12830 3046 aa15.46■□□□□ 0.06
CIT-210ENST00000539413 A0A087WV48 116 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 KMOO15229 486 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 NRDCO43847 1150 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 PRAMEF1O95521 474 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 F3P13726 295 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 ZNF7P17097 686 aaPredicted RBP15.45■□□□□ 0.06
CIT-210ENST00000539413 CD1CP29017 333 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 CCKBRP32239 447 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 GPR3P46089 330 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 FASLGP48023 281 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 CLCNKAP51800 687 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 ZFP36L1Q07352 338 aaKnown RBP15.45■□□□□ 0.06
CIT-210ENST00000539413 SNX1Q13596 522 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 ITGA9Q13797 1035 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 INSCQ1MX18 579 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 P3H1Q32P28 736 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 MAP9Q49MG5 647 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 IYDQ6PHW0 289 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 USP53Q70EK8 1073 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 OR13C4Q8NGS5 318 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 ZNF398Q8TD17 642 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 LRRC45Q96CN5 670 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 ZNF578Q96N58 590 aaPredicted RBP15.45■□□□□ 0.06
CIT-210ENST00000539413 TMEM74Q96NL1 305 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 NUDT22Q9BRQ3 303 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 FRMD8P1Q9BZ68 369 aaPredicted RBP15.45■□□□□ 0.06
CIT-210ENST00000539413 OSGEPL1Q9H4B0 414 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 PRDM8Q9NQV8 689 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 DNAJC16Q9Y2G8 782 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 PCDHGA8Q9Y5G5 932 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 ASXL3Q9C0F0 2248 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 ZFHX4Q86UP3 3567 aa15.45■□□□□ 0.06
CIT-210ENST00000539413 RP1P56715 2156 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 IGHV1OR21-1A0A087WYE8 117 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 GOLGA6L3A6NEY3 463 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 TMX2-CTNND1H3BSU7 103 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 AGRPO00253 132 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 CRTAMO95727 393 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 CPNE6O95741 557 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 TPH1P17752 444 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 STIP1P31948 543 aaKnown RBP15.44■□□□□ 0.06
CIT-210ENST00000539413 TMPRSS15P98073 1019 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 HHEXQ03014 270 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 GTF2H3Q13889 308 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 SIX1Q15475 284 aaPredicted RBP15.44■□□□□ 0.06
CIT-210ENST00000539413 COL28A1Q2UY09 1125 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 LDLRAP1Q5SW96 308 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.44■□□□□ 0.06
CIT-210ENST00000539413 GPRC6AQ5T6X5 926 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 NKAIN2Q5VXU1 208 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 IGF2-ASQ6U949 168 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 RAB11FIP2Q7L804 512 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 C11orf96Q7Z7L8 435 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 PRUNE1Q86TP1 453 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 PIM3Q86V86 326 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 TRAPPC5Q8IUR0 188 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 SLITRK4Q8IW52 837 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 RASGEF1AQ8N9B8 481 aa15.44■□□□□ 0.06
CIT-210ENST00000539413 DDHD1Q8NEL9 900 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms