RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 COPS7BQ9H9Q2 264 aaPredicted RBP17.76■□□□□ 0.43
GNE-204ENST00000539208 RC3H2Q9HBD1 1191 aaKnown RBP17.76■□□□□ 0.43
GNE-204ENST00000539208 SPG21Q9NZD8 308 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 ASB3Q9Y575 518 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.76■□□□□ 0.43
GNE-204ENST00000539208 CAPN8A6NHC0 703 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 CRCPO75575 148 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 HK3P52790 923 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 FOLH1Q04609 750 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 IRAK1BP1Q5VVH5 260 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 SYVN1Q86TM6 617 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 RETREG3Q86VR2 466 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 GPR65Q8IYL9 337 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 TMEM102Q8N9M5 508 aaPredicted RBP17.76■□□□□ 0.43
GNE-204ENST00000539208 SNX31Q8N9S9 440 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 WFDC5Q8TCV5 224 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 PKP2Q99959 881 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 MAP10Q9P2G4 905 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 CNOT11Q9UKZ1 510 aaKnown RBP17.76■□□□□ 0.43
GNE-204ENST00000539208 CPQQ9Y646 472 aa17.76■□□□□ 0.43
GNE-204ENST00000539208 KIAA1671Q9BY89 1806 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 TCRBV3S1A0A5B6 114 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 PRMT5O14744 637 aaPredicted RBP17.75■□□□□ 0.43
GNE-204ENST00000539208 SNX2O60749 519 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 CHEK2O96017 543 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 LAG3P18627 525 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 RPS3P23396 243 aaKnown RBP eCLIP17.75■□□□□ 0.43
GNE-204ENST00000539208 MAPK8P45983 427 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 AGTR2P50052 363 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 GRM2Q14416 872 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 XKR7Q5GH72 579 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 TXNDC8Q6A555 127 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 LYSMD3Q7Z3D4 306 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 CPNE9Q8IYJ1 553 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 MINDY1Q8N5J2 469 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 ACDQ96AP0 544 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 HGH1Q9BTY7 390 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 PCDHAC1Q9H158 963 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 NUDT4Q9NZJ9 180 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 ZNF225Q9UK10 706 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 RAB26Q9ULW5 256 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 SUFUQ9UMX1 484 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 GPR45Q9Y5Y3 372 aa17.75■□□□□ 0.43
GNE-204ENST00000539208 HTRA2O43464 458 aaPredicted RBP17.74■□□□□ 0.43
GNE-204ENST00000539208 PRAMEF12O95522 483 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 RFC2P35250 354 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 SPATS1Q496A3 300 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 MPP7Q5T2T1 576 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 BLOC1S3Q6QNY0 202 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 METTL3Q86U44 580 aaKnown RBP17.74■□□□□ 0.43
GNE-204ENST00000539208 ZNF382Q96SR6 550 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 Q9H521 79 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 SLC52A3Q9NQ40 469 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 MRPL17Q9NRX2 175 aaKnown RBP17.74■□□□□ 0.43
GNE-204ENST00000539208 TMEM45AQ9NWC5 275 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 CD274Q9NZQ7 290 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 ABCD2Q9UBJ2 740 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 GIMAP2Q9UG22 337 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 LSM7Q9UK45 103 aaKnown RBP17.74■□□□□ 0.43
GNE-204ENST00000539208 TBX21Q9UL17 535 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 BTRCQ9Y297 605 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 ZNF510Q9Y2H8 683 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 AP4S1Q9Y587 144 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 ABHD14A-ACY1A0A1B0GW23 586 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 E2F3O00716 465 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 AP1G1O43747 822 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 OBSL1O75147 1896 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 RNASEH2AO75792 299 aaKnown RBP17.74■□□□□ 0.43
GNE-204ENST00000539208 ZCCHC18P0CG32 403 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
GNE-204ENST00000539208 RALGDSQ12967 914 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 PDK3Q15120 406 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 TGFBIQ15582 683 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 TRIM60Q495X7 471 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 C6orf10Q5SRN2 563 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 C1orf53Q5VUE5 145 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 HTR3DQ70Z44 454 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 CPXM2Q8N436 756 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 MARVELD2Q8N4S9 558 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 TRAPPC9Q96Q05 1148 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 GCNAQ96QF7 691 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 FAM192AQ9GZU8 254 aa17.74■□□□□ 0.43
GNE-204ENST00000539208 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.74■□□□□ 0.43
GNE-204ENST00000539208 A0A0U1RQS6 177 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 NCF1BA6NI72 391 aaPredicted RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 NCF1CA8MVU1 366 aaPredicted RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 K7ERQ8 282 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 NR5A2O00482 541 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 ANGPT2O15123 496 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 SOCS5O75159 536 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 NCF1P14598 390 aaPredicted RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 ZNF7P17097 686 aaPredicted RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 CTPS1P17812 591 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 CAPN3P20807 821 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 HSPA13P48723 471 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 SLC7A2P52569 658 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 ATXN3P54252 364 aaPredicted RBP17.73■□□□□ 0.43
GNE-204ENST00000539208 FOXM1Q08050 763 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 RPS6KA2Q15349 733 aa17.73■□□□□ 0.43
GNE-204ENST00000539208 IL23RQ5VWK5 629 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms