RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	LAMB3	Q13751	1172 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CCNG2	Q16589	344 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TBC1D25	Q3MII6	688 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ATP13A5	Q4VNC0	1218 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	DENND5A	Q6IQ26	1287 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	IYD	Q6PHW0	289 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SLC30A9	Q6PML9	568 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TRIM74	Q86UV6	250 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LRRTM4	Q86VH4	590 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SLC25A41	Q8N5S1	370 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	FAM71D	Q8N9W8	422 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	WDR36	Q8NI36	951 aa	Known RBP	12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	BLOC1S5	Q8TDH9	187 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PTCD2	Q8WV60	388 aa	Known RBP	12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	HEXDC	Q8WVB3	486 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	FGF11	Q92914	225 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TBL1Y	Q9BQ87	522 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	FICD	Q9BVA6	458 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	STRADB	Q9C0K7	418 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	STN1	Q9H668	368 aa	Known RBP	12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	RABGEF1	Q9UJ41	708 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	DRG1	Q9Y295	367 aa	Known RBP	12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PPP2R2C	Q9Y2T4	447 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AK5	Q9Y6K8	562 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	RNF215	Q9Y6U7	377 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	RHPN2P1	A8MT19	583 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GAPDHS	O14556	408 aa	Predicted RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CDK14	O94921	469 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CPNE6	O95741	557 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	RPLP0	P05388	317 aa	Known RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZNF7	P17097	686 aa	Predicted RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	VCL	P18206	1134 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	XRCC1	P18887	633 aa	Predicted RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PDX1	P52945	283 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	EPHA4	P54764	986 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	INHBC	P55103	352 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CCL7	P80098	99 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	DMPK	Q09013	629 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TMEM115	Q12893	351 aa	Predicted RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GPR33	Q49SQ1	333 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AGAP9	Q5VTM2	703 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ABRAXAS1	Q6UWZ7	409 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CHST15	Q7LFX5	561 aa	Predicted RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SLC9B2	Q86UD5	537 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	RBM12B	Q8IXT5	1001 aa	Known RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZNF398	Q8TD17	642 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PEX13	Q92968	403 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TTC25	Q96NG3	672 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SLC46A1	Q96NT5	459 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TMEM121	Q9BTD3	319 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TLR10	Q9BXR5	811 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	OR2AG1	Q9H205	316 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	C10orf88	Q9H8K7	445 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	THSD1	Q9NS62	852 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PDP2	Q9P2J9	529 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ACSL6	Q9UKU0	697 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TMPRSS11E	Q9UL52	423 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	RIMKLB	Q9ULI2	386 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PCDHB1	Q9Y5F3	818 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PCDHGA7	Q9Y5G6	932 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PTPRQ	Q9UMZ3	2332 aa		12.15	□□□□□ -0.46
CLTCL1-205	ENST00000538828	KIF26B	Q2KJY2	2108 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TCRBV7S2A1N4T	A0A589	114 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GOLGA6L3	A6NEY3	463 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	AP3B1	O00203	1094 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	HGS	O14964	777 aa	Predicted RBP	12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	B4GAT1	O43505	415 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	BRINP1	O60477	761 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SUN1	O94901	812 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ITGA2B	P08514	1039 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	EIF2S3	P41091	472 aa	Known RBP	12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ZNF140	P52738	457 aa	Predicted RBP	12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CLDN6	P56747	220 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GABRE	P78334	506 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	GTF2H3	Q13889	308 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ARMC3	Q5W041	872 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ALS2CL	Q60I27	953 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MARK2	Q7KZI7	788 aa	Known RBP	12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	C11orf96	Q7Z7L8	435 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CLEC14A	Q86T13	490 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PIM3	Q86V86	326 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	MARCH9	Q86YJ5	346 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SLITRK4	Q8IW52	837 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	SLC37A2	Q8TED4	501 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	STYX	Q8WUJ0	223 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ULK4	Q96C45	1275 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	CCDC97	Q96F63	343 aa	Predicted RBP	12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	BPIFA1	Q9NP55	256 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	ASCL3	Q9NQ33	180 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	LZTFL1	Q9NQ48	299 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	PAK5	Q9P286	719 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TBC1D29	Q9UFV1	150 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	JRKL	Q9Y4A0	524 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	WDFY3	Q8IZQ1	3526 aa		12.14	□□□□□ -0.47
CLTCL1-205	ENST00000538828	IGHV1OR21-1	A0A087WYE8	117 aa		12.13	□□□□□ -0.47
CLTCL1-205	ENST00000538828	LILRA5	A6NI73	299 aa		12.13	□□□□□ -0.47

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