RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 TCEAL1Q15170 157 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 TBR1Q16650 682 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 ZDHHC20Q5W0Z9 365 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 BORAQ6PGQ7 559 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 BZW1Q7L1Q6 419 aaKnown RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 ARHGAP22Q7Z5H3 698 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 TMC3Q7Z5M5 1100 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 ZNF761Q86XN6 746 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 PLXDC1Q8IUK5 500 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 RHOT1Q8IXI2 618 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 RBM12BQ8IXT5 1001 aaKnown RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 NLGN4XQ8N0W4 816 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 NLGN4YQ8NFZ3 816 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 SLC35G2Q8TBE7 412 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 HTR3CQ8WXA8 447 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 GLYATL1Q969I3 302 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 PMEPA1Q969W9 287 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 KIAA1143Q96AT1 154 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 RTP4Q96DX8 246 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 CCDC42Q96M95 316 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 PLEKHG4BQ96PX9 1271 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 VPS35Q96QK1 796 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 SPATA16Q9BXB7 569 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 SLC12A9Q9BXP2 914 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 TRIT1Q9H3H1 467 aaKnown RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 CLMPQ9H6B4 373 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 TRIM39Q9HCM9 518 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 FBXO8Q9NRD0 319 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 GEMIN8Q9NWZ8 242 aaKnown RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 OCIAD1Q9NX40 245 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 ATXN10Q9UBB4 475 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 CPNE7Q9UBL6 633 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 TUBD1Q9UJT1 453 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 INTUQ9ULD6 942 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 PRKAB1Q9Y478 270 aa8.54□□□□□ -1.04
DDB1-212ENST00000538470 UBR5O95071 2799 aaPredicted RBP8.54□□□□□ -1.04
DDB1-212ENST00000538470 PRR19A6NJB7 356 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 KMOO15229 486 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 TOX3O15405 576 aaPredicted RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 PSTPIP1O43586 416 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 SNX2O60749 519 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 ZIC2O95409 532 aaPredicted RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 C9P02748 559 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 FAM87AP0C7U9 286 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 LIFP15018 202 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 ZNF8P17098 575 aaPredicted RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 VCLP18206 1134 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 XRCC1P18887 633 aaPredicted RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 MPSTP25325 297 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 MAP4P27816 1152 aaKnown RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 TNNT3P45378 269 aaPredicted RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 NR2C2P49116 596 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 TFDP2Q14188 446 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 PRKD1Q15139 912 aaPredicted RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 PCSK7Q16549 785 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 INSCQ1MX18 579 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 TEX44Q53QW1 395 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 AGAP9Q5VTM2 703 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 ALS2CLQ60I27 953 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 ANKS6Q68DC2 871 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 CCDC70Q6NSX1 233 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 CYB5D1Q6P9G0 228 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 WASH2PQ6VEQ5 465 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 ATG14Q6ZNE5 492 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 ADGRG6Q86SQ4 1221 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 LRRTM4Q86VH4 590 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 RFX6Q8HWS3 928 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 CNGA4Q8IV77 575 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 VSTM4Q8IW00 320 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 TRIM48Q8IWZ4 208 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 GPR26Q8NDV2 337 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 DTX3LQ8TDB6 740 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 LRRN4Q8WUT4 740 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 NCSTNQ92542 709 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 EID2BQ96D98 161 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 SLC45A3Q96JT2 553 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 AGAP3Q96P47 875 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 CEP41Q9BYV8 373 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 GPR63Q9BZJ6 419 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 ZCCHC2Q9C0B9 1178 aaKnown RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 OR2AG1Q9H205 316 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 OSGEPL1Q9H4B0 414 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 TRABDQ9H4I3 376 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 GLOD4Q9HC38 313 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 WASH6PQ9NQA3 447 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 KLC4Q9NSK0 619 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 SIDT1Q9NXL6 827 aaKnown RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 PILRAQ9UKJ1 303 aa8.53□□□□□ -1.04
DDB1-212ENST00000538470 TMEM184BQ9Y519 407 aaPredicted RBP8.53□□□□□ -1.04
DDB1-212ENST00000538470 TRBV23OR9-2A0A075B6M9 112 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 PDZK1P1A8MUH7 402 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 POLR1CO15160 346 aaPredicted RBP8.52□□□□□ -1.05
DDB1-212ENST00000538470 SPOPO43791 374 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 KCNJ13O60928 360 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 STK17BO94768 372 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 UBXN7O94888 489 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 WISP1O95388 367 aa8.52□□□□□ -1.05
DDB1-212ENST00000538470 DLGAP3O95886 979 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms