RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 TBX18O95935 607 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 NMBRP28336 390 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 RTP1P59025 263 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 COL9A2Q14055 689 aaPredicted RBP11.13□□□□□ -0.63
LINC00346-201ENST00000538077 SLC30A6Q6NXT4 461 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 PRELID2Q8N945 189 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 ZMIZ2Q8NF64 920 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 TSEN15Q8WW01 171 aaKnown RBP11.13□□□□□ -0.63
LINC00346-201ENST00000538077 ARMC5Q96C12 935 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 ART5Q96L15 291 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 OR2AG1Q9H205 316 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 C15orf38-AP3S2A0A0A6YYH1 394 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 A0A0G2JN53 185 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 SSNA1O43805 119 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 CHRNGP07510 517 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 HOXC12P31275 282 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 CDH5P33151 784 aaPredicted RBP11.13□□□□□ -0.63
LINC00346-201ENST00000538077 RCVRNP35243 200 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 TOP3AQ13472 1001 aaPredicted RBP11.13□□□□□ -0.63
LINC00346-201ENST00000538077 GTF2H2Q13888 395 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 DUPD1Q68J44 220 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 GTF2H2CQ6P1K8 395 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 ZFP1Q6P2D0 407 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 ARPINQ7Z6K5 226 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 LNX2Q8N448 690 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 C1orf127Q8N9H9 656 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 DBF4BQ8NFT6 615 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 DQX1Q8TE96 717 aaKnown RBP11.13□□□□□ -0.63
LINC00346-201ENST00000538077 WDR55Q9H6Y2 383 aaPredicted RBP11.13□□□□□ -0.63
LINC00346-201ENST00000538077 DNAJC28Q9NX36 388 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 ERVK-11Q9UQG0 969 aa11.13□□□□□ -0.63
LINC00346-201ENST00000538077 CFAP20Q9Y6A4 193 aaKnown RBP11.13□□□□□ -0.63
LINC00346-201ENST00000538077 FADS2O95864 444 aaKnown RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 HOXB8P17481 243 aaPredicted RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 CES1P23141 567 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 FSHRP23945 695 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 MYL9P24844 172 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 RPL3P39023 403 aaKnown RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GABRB2P47870 512 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 EIF2B2P49770 351 aaKnown RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GAD2Q05329 585 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GALNTL5Q7Z4T8 443 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 CHERPQ8IWX8 916 aaKnown RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 TSTD1Q8NFU3 115 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GINS4Q9BRT9 223 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GBA3Q9H227 469 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 DNAJC11Q9NVH1 559 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 PCYOX1Q9UHG3 505 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 IKZF2Q9UKS7 526 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 ACTL7BQ9Y614 415 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 A0A0J9YYE9 177 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 PSIP1O75475 530 aaKnown RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 ILF2Q12905 390 aaKnown RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 PCBP2Q15366 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 SPANXN2Q5MJ10 180 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 C12orf56Q8IXR9 622 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 TSPAN14Q8NG11 270 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 RAP2CQ9Y3L5 183 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 INSIG1O15503 277 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 UGT1A5P35504 534 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 ITGA1P56199 1179 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 BNC1Q01954 994 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GNA12Q03113 381 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GBE1Q04446 702 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 ANKRD46Q86W74 232 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 SPPL2CQ8IUH8 684 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 TBATAQ96M53 351 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 HEPHQ9BQS7 1158 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GPC6Q9Y625 555 aaPredicted RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 KCNA5P22460 613 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 ARCN1P48444 511 aaKnown RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 PURAQ00577 322 aaKnown RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 ITGADQ13349 1161 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 TIGD2Q4W5G0 525 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 SLC8B1Q6J4K2 584 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 ERVW-1Q9UQF0 538 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 TRAF6Q9Y4K3 522 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 XKRYO14609 159 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 PRKCHP24723 683 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 GATMP50440 423 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 ATP6V0D1P61421 351 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 SMU1Q2TAY7 513 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 LIX1Q8N485 282 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 CKAP2Q8WWK9 683 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 LRTM1Q9HBL6 345 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 DIABLOQ9NR28 239 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
LINC00346-201ENST00000538077 MAFBQ9Y5Q3 323 aaPredicted RBP11.12□□□□□ -0.63
LINC00346-201ENST00000538077 RGSL1A5PLK6 1076 aa11.11□□□□□ -0.63
LINC00346-201ENST00000538077 MAGEB3O15480 346 aa11.11□□□□□ -0.63
LINC00346-201ENST00000538077 ARL2P36404 184 aa11.11□□□□□ -0.63
LINC00346-201ENST00000538077 SH3PXD2AQ5TCZ1 1133 aa11.11□□□□□ -0.63
LINC00346-201ENST00000538077 MMAAQ8IVH4 418 aaKnown RBP11.11□□□□□ -0.63
LINC00346-201ENST00000538077 BEND7Q8N7W2 519 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms