RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 BIRC8Q96P09 236 aa14.21□□□□□ -0.13
USP44-203ENST00000537435 ACOX2Q99424 681 aa14.21□□□□□ -0.13
USP44-203ENST00000537435 KCTD14Q9BQ13 255 aaPredicted RBP14.21□□□□□ -0.13
USP44-203ENST00000537435 ZBED2Q9BTP6 218 aa14.21□□□□□ -0.13
USP44-203ENST00000537435 HGH1Q9BTY7 390 aa14.21□□□□□ -0.13
USP44-203ENST00000537435 C1orf50Q9BV19 199 aa14.21□□□□□ -0.13
USP44-203ENST00000537435 GPR62Q9BZJ7 368 aa14.21□□□□□ -0.13
USP44-203ENST00000537435 MAGEH1Q9H213 219 aa14.21□□□□□ -0.13
USP44-203ENST00000537435 ZFP37Q9Y6Q3 630 aaPredicted RBP14.21□□□□□ -0.13
USP44-203ENST00000537435 CCDC154A6NI56 674 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 OR6C75A6NL08 312 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 INSIG1O15503 277 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 KLK8O60259 260 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 SNX2O60749 519 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 NIPSNAP2O75323 286 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 BMP10O95393 424 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 PRLP01236 227 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 GPIP06744 558 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 CES1P23141 567 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 CASP2P42575 452 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 LIPEQ05469 1076 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 XKR7Q5GH72 579 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 CCSAPQ6IQ19 270 aaPredicted RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 PSAPL1Q6NUJ1 521 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 PIANPQ8IYJ0 282 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 SIDT2Q8NBJ9 832 aaKnown RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 OR2T11Q8NH01 316 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 GIPC2Q8TF65 315 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 C1QTNF3Q9BXJ4 246 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP44-203ENST00000537435 SLAMF8Q9P0V8 285 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 FNDC3AQ9Y2H6 1198 aaKnown RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 TANC1Q9C0D5 1861 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 TCRBV5S2A0A599 114 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 C2orf81A6NN90 581 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 OR1I1O60431 355 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 VPS26AO75436 327 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 EEDO75530 441 aaKnown RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 SLC22A3O75751 556 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 MLYCDO95822 493 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 PKMP14618 531 aaKnown RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 MYF6P23409 242 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 CCND3P30281 292 aaPredicted RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 FLT3LGP49771 235 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 HK3P52790 923 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 OXCT1P55809 520 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 GRIK2Q13002 908 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 GPR162Q16538 588 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 SPATS1Q496A3 300 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 KCTD21Q4G0X4 260 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 TTC33Q6PID6 262 aaPredicted RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 TXNDC11Q6PKC3 985 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 RNF19BQ6ZMZ0 732 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 EFL1Q7Z2Z2 1120 aaKnown RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 DCBLD1Q8N8Z6 715 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 LPCAT1Q8NF37 534 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 TMEM74Q96NL1 305 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 TDRD1Q9BXT4 1180 aaKnown RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 LIN28AQ9H9Z2 209 aaKnown RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 TIMMDC1Q9NPL8 285 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 TRMT6Q9UJA5 497 aaKnown RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 LEF1Q9UJU2 399 aaPredicted RBP14.2□□□□□ -0.14
USP44-203ENST00000537435 ASB1Q9Y576 335 aa14.2□□□□□ -0.14
USP44-203ENST00000537435 GIPC1O14908 333 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 ACOX3O15254 700 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 ACSL4O60488 711 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 SEC24DO94855 1032 aaPredicted RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 VNN2O95498 520 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 TSPAN12O95859 305 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 CDK4P11802 303 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 CKBP12277 381 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 MRPL19P49406 292 aaKnown RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 RPS24P62847 133 aaKnown RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 MBTPS1Q14703 1052 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 SLC36A3Q495N2 470 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 C5orf22Q49AR2 442 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 RSPO2Q6UXX9 243 aaPredicted RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 SPRED1Q7Z699 444 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 PTRH1Q86Y79 214 aaKnown RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 OR56A4Q8NGH8 313 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 UPF1Q92900 1129 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP44-203ENST00000537435 BRINP2Q9C0B6 783 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 MUC13Q9H3R2 512 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 SCUBE2Q9NQ36 999 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 EIF2B4Q9UI10 523 aaKnown RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 FKBPLQ9UIM3 349 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 PHF24Q9UPV7 400 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 EI24O14681 340 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 OR4F21O95013 312 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 RASAL1O95294 804 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 C1RP00736 705 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 ZDHHC11BP0C7U3 371 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 FCGR1AP12314 374 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 CR2P20023 1033 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 LPOP22079 712 aaPredicted RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 IL12AP29459 219 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 MC4RP32245 332 aa14.19□□□□□ -0.14
USP44-203ENST00000537435 KPNA1P52294 538 aaPredicted RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 POLR2JP52435 117 aaKnown RBP14.19□□□□□ -0.14
USP44-203ENST00000537435 HPCAP84074 193 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms