RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 NLGN3Q9NZ94 848 aa7.05□□□□□ -1.28
YBX3-206ENST00000536823 B4GALT6Q9UBX8 382 aa7.05□□□□□ -1.28
YBX3-206ENST00000536823 INTUQ9ULD6 942 aa7.05□□□□□ -1.28
YBX3-206ENST00000536823 CNOT6Q9ULM6 557 aaKnown RBP7.05□□□□□ -1.28
YBX3-206ENST00000536823 CSNK1G3Q9Y6M4 447 aa7.05□□□□□ -1.28
YBX3-206ENST00000536823 LRP4O75096 1905 aa7.05□□□□□ -1.28
YBX3-206ENST00000536823 ATRXP46100 2492 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 MYLKQ15746 1914 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 LY6G6EA0A0G2JKS1 128 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 LRRD1A4D1F6 860 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 NEMP2A6NFY4 417 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 TMEM110-MUSTN1A8MSY1 372 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 K7ESM1 405 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 AQP9O43315 295 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 NEBLO76041 1014 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 RECQL5O94762 991 aaPredicted RBP7.04□□□□□ -1.28
YBX3-206ENST00000536823 CAPNS1P04632 268 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 PCCBP05166 539 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 GM2AP17900 193 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 ACP1P24666 158 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 HNF1BP35680 557 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 ARHGAP25P42331 645 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 PEX5P50542 639 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 MAXP61244 160 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 POLR2LP62875 67 aaKnown RBP7.04□□□□□ -1.28
YBX3-206ENST00000536823 SEMG2Q02383 582 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 GBE1Q04446 702 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 TRAF2Q12933 501 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 MTM1Q13496 603 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 NFATC4Q14934 902 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 ANKRD20A8PQ5CZ79 823 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 HES3Q5TGS1 186 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 MARC1Q5VT66 337 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 LRRC38Q5VT99 294 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 TIGD7Q6NT04 549 aaPredicted RBP7.04□□□□□ -1.28
YBX3-206ENST00000536823 LIPIQ6XZB0 460 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 VSIG1Q86XK7 387 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 PHACTR4Q8IZ21 702 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 RBFAQ8N0V3 343 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 TEX26Q8N6G2 289 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 PQLC3Q8N755 202 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 TC2NQ8N9U0 490 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 KCTD6Q8NC69 237 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 SLC35G2Q8TBE7 412 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 BTN2A2Q8WVV5 523 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 RAPGEF5Q92565 580 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 TSGA13Q96PP4 275 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 FERD3LQ96RJ6 166 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 TRIM5Q9C035 493 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 USP29Q9HBJ7 922 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 NT5MQ9NPB1 228 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 DTLQ9NZJ0 730 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 SPASTQ9UBP0 616 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 REV1Q9UBZ9 1251 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 APOBEC3BQ9UH17 382 aaKnown RBP7.04□□□□□ -1.28
YBX3-206ENST00000536823 AMACRQ9UHK6 382 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 PNMA8BQ9ULN7 279 aaPredicted RBP7.04□□□□□ -1.28
YBX3-206ENST00000536823 CORINQ9Y5Q5 1042 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 U3KQA8 63 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 IGSF10Q6WRI0 2623 aa7.04□□□□□ -1.28
YBX3-206ENST00000536823 LOC400499M0QZD8 3231 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 UNC13CQ8NB66 2214 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 PRAMEF27A3QJZ7 478 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 FAM149AA5PLN7 773 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 C3orf70A6NLC5 250 aaPredicted RBP7.03□□□□□ -1.28
YBX3-206ENST00000536823 LMO7DNF2Z398 122 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 TPP1O14773 563 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 MATN3O15232 486 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 KRT37O76014 449 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 STK10O94804 968 aaKnown RBP7.03□□□□□ -1.28
YBX3-206ENST00000536823 HEXIM1O94992 359 aaKnown RBP7.03□□□□□ -1.28
YBX3-206ENST00000536823 PGLSO95336 258 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 CKMT1AP12532 417 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 KDELR1P24390 212 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 CCNCP24863 283 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 NFKBIAP25963 317 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 HTR1BP28222 390 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 VIPR1P32241 457 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 SLC1A1P43005 524 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 HADHBP55084 474 aaKnown RBP7.03□□□□□ -1.28
YBX3-206ENST00000536823 CLDN6P56747 220 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 KIAA1024LP59773 190 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 PPARDQ03181 441 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 TCEAL1Q15170 157 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 CNGA3Q16281 694 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 ALG11Q2TAA5 492 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 ZFYVE27Q5T4F4 411 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 ARMC12Q5T9G4 340 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 ZCCHC8Q6NZY4 707 aaKnown RBP7.03□□□□□ -1.28
YBX3-206ENST00000536823 USP45Q70EL2 814 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 PROSER1Q86XN7 944 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 MARCH9Q86YJ5 346 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 MFSD4AQ8N468 514 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 FSTL5Q8N475 847 aaPredicted RBP7.03□□□□□ -1.28
YBX3-206ENST00000536823 TAB3Q8N5C8 712 aaPredicted RBP7.03□□□□□ -1.28
YBX3-206ENST00000536823 PLD5Q8N7P1 536 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 KCT2Q8NC54 265 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 ATL2Q8NHH9 583 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 LMX1AQ8TE12 382 aa7.03□□□□□ -1.28
YBX3-206ENST00000536823 HDAC11Q96DB2 347 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms