RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PRR11Q96HE9 360 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TMEM121Q9BTD3 319 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 GBA3Q9H227 469 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 BPIFA1Q9NP55 256 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ASCL3Q9NQ33 180 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 RAD18Q9NS91 495 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ATXN10Q9UBB4 475 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZNHIT2Q9UHR6 403 aa17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ATXN7L1Q9ULK2 861 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1A-209ENST00000536717 NUAK1O60285 661 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 STIP1P31948 543 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 LRP8Q14114 963 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 NR1D2Q14995 579 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 COL28A1Q2UY09 1125 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ANKRD20A2Q5SQ80 823 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZNF648Q5T619 568 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ANKRD20A1Q5TYW2 823 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ANKRD20A3Q5VUR7 823 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PDPK2PQ6A1A2 396 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 IGF2-ASQ6U949 168 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 LSMEM2Q8N112 164 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TTC30BQ8N4P2 665 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 MAGOHBQ96A72 148 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 FOXP3Q9BZS1 431 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TRABDQ9H4I3 376 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 RMI1Q9H9A7 625 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 LHX6Q9UPM6 363 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 DRG1Q9Y295 367 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CACNA1GO43497 2377 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 B4GAT1O43505 415 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SLC25A14O95258 325 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 EML2O95834 649 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 HLA-DPA1P20036 260 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PEX6Q13608 980 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CHST15Q7LFX5 561 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TMPRSS9Q7Z410 1059 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 FAM71DQ8N9W8 422 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 GLYATL1Q969I3 302 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 LIN37Q96GY3 246 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZNF578Q96N58 590 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PLEKHG4BQ96PX9 1271 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 IL17CQ9P0M4 197 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TMPRSS11EQ9UL52 423 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PCDHGA8Q9Y5G5 932 aa17.67■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PIKFYVEQ9Y2I7 2098 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CCDC187A0A096LP49 1063 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PPM1DO15297 605 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZNF500O60304 480 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZNF8P17098 575 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ITPKBP27987 946 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PSMB4P28070 264 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CCKBRP32239 447 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 GEMP55040 296 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ERVPABLB-1P60509 514 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CYP1B1Q16678 543 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ITPRIPL1Q6GPH6 555 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ADGRG6Q86SQ4 1221 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 WDR36Q8NI36 951 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SLC46A1Q96NT5 459 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 FSD1LQ9BXM9 530 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 OR2AG1Q9H205 316 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TRIM39Q9HCM9 518 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 HACD3Q9P035 362 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CDC23Q9UJX2 597 aa17.66■□□□□ 0.42
TNFRSF1A-209ENST00000536717 MGAQ8IWI9 3026 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 RHPN2P1A8MT19 583 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 GRID2O43424 1007 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 PHF2O75151 1096 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ANXA9O76027 345 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 AGTP01019 485 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ACP5P13686 325 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ADRA1AP35348 466 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TNNT3P45378 269 aaPredicted RBP17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 INHBCP55103 352 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 OR1D5P58170 312 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ZFP36L1Q07352 338 aaKnown RBP17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 OLIG2Q13516 323 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TUBB2AQ13885 445 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 ATP13A5Q4VNC0 1218 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 KHDC1Q4VXA5 237 aaKnown RBP17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 GSTA5Q7RTV2 222 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CCDC89Q8N998 374 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CCDC110Q8TBZ0 833 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 BLOC1S5Q8TDH9 187 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SLC37A2Q8TED4 501 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 CRELD1Q96HD1 420 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 SPATA13Q96N96 652 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 VPS35Q96QK1 796 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TUBB2BQ9BVA1 445 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 FICDQ9BVA6 458 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 TBC1D29Q9UFV1 150 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 KCNK6Q9Y257 313 aa17.65■□□□□ 0.42
TNFRSF1A-209ENST00000536717 C5orf60A6NFR6 353 aa17.64■□□□□ 0.41
TNFRSF1A-209ENST00000536717 GPR89AB7ZAQ6 455 aa17.64■□□□□ 0.41
TNFRSF1A-209ENST00000536717 CCDC188H7C350 402 aa17.64■□□□□ 0.41
TNFRSF1A-209ENST00000536717 CHUKO15111 745 aa17.64■□□□□ 0.41
TNFRSF1A-209ENST00000536717 MTX2O75431 263 aa17.64■□□□□ 0.41
TNFRSF1A-209ENST00000536717 IFNB1P01574 187 aa17.64■□□□□ 0.41
TNFRSF1A-209ENST00000536717 GPR89BP0CG08 455 aa17.64■□□□□ 0.41
TNFRSF1A-209ENST00000536717 ALDH4A1P30038 563 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms