RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TBR1Q16650 682 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 PYCR3Q53H96 274 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 ZNF574Q6ZN55 896 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 PID1Q7Z2X4 250 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 LYSMD3Q7Z3D4 306 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 KIAA1328Q86T90 577 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 PIM3Q86V86 326 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 ZC3H18Q86VM9 953 aaKnown RBP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 CCDC50Q8IVM0 306 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 ACTL9Q8TC94 416 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 ZDHHC1Q8WTX9 485 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 JPH3Q8WXH2 748 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 OXNAD1Q96HP4 312 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 MRGPRX2Q96LB1 330 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 C19orf43Q9BQ61 176 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 NUDT22Q9BRQ3 303 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 HEMGNQ9BXL5 484 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 GSDMCQ9BYG8 508 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 RMI1Q9H9A7 625 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 AKAP7Q9P0M2 348 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-207ENST00000536483 IL17BQ9UHF5 180 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 ST14Q9Y5Y6 855 aa12.33□□□□□ -0.44
PRKDC-207ENST00000536483 RHPN2P1A8MT19 583 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 GOLGA6L6A8MZA4 724 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 DDX3YO15523 660 aaKnown RBP12.32□□□□□ -0.44
PRKDC-207ENST00000536483 DNAJC6O75061 913 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 ECEL1O95672 775 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 NFKB1P19838 968 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 HLA-DPA1P20036 260 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 AK4P27144 223 aaPredicted RBP12.32□□□□□ -0.44
PRKDC-207ENST00000536483 CD82P27701 267 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 RBL1P28749 1068 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 ADCY8P40145 1251 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 CLCNKAP51800 687 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 NAP1L1P55209 391 aaKnown RBP12.32□□□□□ -0.44
PRKDC-207ENST00000536483 WNT3AP56704 352 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 OTUD4Q01804 1114 aaKnown RBP12.32□□□□□ -0.44
PRKDC-207ENST00000536483 ILF3Q12906 894 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRKDC-207ENST00000536483 SQSTM1Q13501 440 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 GALNT3Q14435 633 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 LLGL1Q15334 1064 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 CLPPQ16740 277 aaPredicted RBP12.32□□□□□ -0.44
PRKDC-207ENST00000536483 TMEM164Q5U3C3 297 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 ZDHHC20Q5W0Z9 365 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 CCDC70Q6NSX1 233 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 RANBP10Q6VN20 620 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 B4GALNT4Q76KP1 1039 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 PEX26Q7Z412 305 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 ZNF438Q7Z4V0 828 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 UBL4BQ8N7F7 174 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 ZSCAN1Q8NBB4 408 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 TTC13Q8NBP0 860 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 RCBTB1Q8NDN9 531 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 GPR26Q8NDV2 337 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 PTCD2Q8WV60 388 aaKnown RBP12.32□□□□□ -0.44
PRKDC-207ENST00000536483 PATE1Q8WXA2 126 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 PLEKHG4BQ96PX9 1271 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 FERMT1Q9BQL6 677 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 ZSCAN5AQ9BUG6 496 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 GBA3Q9H227 469 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRKDC-207ENST00000536483 HACD3Q9P035 362 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 TAAR2Q9P1P5 351 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 CD84Q9UIB8 345 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 ZNF711Q9Y462 761 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 NAV2Q8IVL1 2488 aa12.32□□□□□ -0.44
PRKDC-207ENST00000536483 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 IGHV5-10-1A0A0J9YXX1 117 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 A0A0U1RQJ8 604 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 C5orf60A6NFR6 353 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 FADS2P1A8MWK0 482 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 TERTO14746 1132 aaKnown RBP12.31□□□□□ -0.44
PRKDC-207ENST00000536483 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 PMPCBO75439 489 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 RBP3P10745 1247 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 SFTPCP11686 197 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 CD1CP29017 333 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 ADRA1AP35348 466 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 GNPDA1P46926 289 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 POLD2P49005 469 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 CTBSQ01459 385 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 SLC1A5Q15758 541 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 FAM182AQ5T1J6 154 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 ITPRIPL1Q6GPH6 555 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 SLC30A9Q6PML9 568 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 ATG14Q6ZNE5 492 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 CDKL3Q8IVW4 592 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-207ENST00000536483 TTC30BQ8N4P2 665 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 TRAM1L1Q8N609 369 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 CCDC112Q8NEF3 446 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 PMEPA1Q969W9 287 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 HAUS1Q96CS2 278 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 CCDC74BQ96LY2 380 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 PPP1R2P1Q96PQ5 205 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 VPS35Q96QK1 796 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 GORASP1Q9BQQ3 440 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 DESI2Q9BSY9 194 aa12.31□□□□□ -0.44
PRKDC-207ENST00000536483 TSGA10Q9BZW7 698 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms