RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 DUS3LQ96G46 650 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PCED1BQ96HM7 432 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PIWIL1Q96J94 861 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PPP1R2P1Q96PQ5 205 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ACE2Q9BYF1 805 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SHCBP1LQ9BZQ2 653 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 RAB6CQ9H0N0 254 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 DPEP3Q9H4B8 488 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ZNF385DQ9H6B1 395 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 ZBTB26Q9HCK0 441 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 CASS4Q9NQ75 786 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 KLHL8Q9P2G9 620 aaPredicted RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 TDRKHQ9Y2W6 561 aaKnown RBP11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 PSAT1Q9Y617 370 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 WNT6Q9Y6F9 365 aa11.57□□□□□ -0.56
CHRNB1-202ENST00000536404 SDK1Q7Z5N4 2213 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 ZNF701M0R085 212 aaPredicted RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 PFDN6O15212 129 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 DAB1O75553 588 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 MAP3K6O95382 1288 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 EGFP01133 1207 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 C2P06681 752 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 CKMP06732 381 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 USP17L7P0C7H9 530 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 PTPN1P18031 435 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 PSMB4P28070 264 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 CDK9P50750 372 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 THOP1P52888 689 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 RPS3AP61247 264 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 ESRRGP62508 458 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 GRSF1Q12849 480 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 SIM2Q14190 667 aaPredicted RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 PDGFRLQ15198 375 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 ZNF77Q15935 545 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 LSM12Q3MHD2 195 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 BSPRYQ5W0U4 402 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 DGLUCYQ7Z3D6 616 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 CYP2U1Q7Z449 544 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 LINC00523Q86TU6 105 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 SYNPOQ8N3V7 929 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 DNAAF3Q8N9W5 541 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 TERB1Q8NA31 727 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 CCNYQ8ND76 341 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 GABPB2Q8TAK5 448 aaPredicted RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 SH3RF2Q8TEC5 729 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 RNF139Q8WU17 664 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 RCN3Q96D15 328 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 CCDC126Q96EE4 140 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 SPATA17Q96L03 361 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 CCDC138Q96M89 665 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 OR52B2Q96RD2 323 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 PRPF18Q99633 342 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 HEPHQ9BQS7 1158 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 SLC2A11Q9BYW1 496 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 GRIP2Q9C0E4 1043 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 LINC00597Q9H2U6 94 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 COPS7BQ9H9Q2 264 aaPredicted RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 PNPLA3Q9NST1 481 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 DUS2Q9NX74 493 aaKnown RBP11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 DLL3Q9NYJ7 618 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 GMEB2Q9UKD1 530 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 RAB23Q9ULC3 237 aa11.56□□□□□ -0.56
CHRNB1-202ENST00000536404 SPTBN2O15020 2390 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 MED19A0JLT2 244 aaPredicted RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 GOLGA8CPA6NN73 597 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 CLDN5O00501 218 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 MFSD11O43934 449 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 PIGNO95427 931 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 C8BP07358 591 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 ENO3P13929 434 aaPredicted RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 GOT1P17174 413 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 XRCC1P18887 633 aaPredicted RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 HDCP19113 662 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 TFEBP19484 476 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 GJA4P35212 333 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 GRIA4P48058 902 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 HCAR3P49019 387 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 PXNP49023 591 aaPredicted RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 EIF2B2P49770 351 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 SULT1E1P49888 294 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 ZXDBP98169 803 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 MYBPC1Q00872 1141 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 SPEM2Q0P670 501 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 EIF2B5Q13144 721 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 PTK2BQ14289 1009 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 PUM1Q14671 1186 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 MAPRE1Q15691 268 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 MYLK3Q32MK0 819 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 LAIR1Q6GTX8 287 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 PIWIL4Q7Z3Z4 852 aaKnown RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 ACOT1Q86TX2 421 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 KCNMB4Q86W47 210 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 BPHLQ86WA6 291 aaPredicted RBP11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 ZNF567Q8N184 647 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 PACRGLQ8N7B6 248 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 TSPAN14Q8NG11 270 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 ZFP28Q8NHY6 868 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 OSCP1Q8WVF1 389 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 SCYL1Q96KG9 808 aa11.55□□□□□ -0.56
CHRNB1-202ENST00000536404 ZNF597Q96LX8 424 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms