RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 NUP210Q8TEM1 1887 aaPredicted RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 PRRG1O14668 218 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 GREM1O60565 184 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 SOCS5O75159 536 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 VPS26AO75436 327 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 NDUFS3O75489 264 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 TMCC1O94876 653 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 CD160O95971 181 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 C1RP00736 705 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 ESR1P03372 595 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 F7P08709 466 aaPredicted RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 ANPEPP15144 967 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 RPL17P18621 184 aaKnown RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 CDC25CP30307 473 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 RGRP47804 291 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 ACADVLP49748 655 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 SCNN1BP51168 640 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 PLK1P53350 603 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 SLC25A3Q00325 362 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 RAD51Q06609 339 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 TBL3Q12788 808 aaKnown RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 TWF1Q12792 350 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 GRIK2Q13002 908 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 STX5Q13190 355 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 CUL3Q13618 768 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 CRY1Q16526 586 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 SPATS1Q496A3 300 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 GPR158Q5T848 1215 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 LYPLAL1Q5VWZ2 237 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 UGT3A1Q6NUS8 523 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 TMEM207Q6UWW9 146 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 HTR3DQ70Z44 454 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 TMEM150AQ86TG1 271 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 DEFB107AQ8IZN7 70 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 CLYBLQ8N0X4 340 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 ZNF557Q8N988 423 aaPredicted RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 OR4K2Q8NGD2 314 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 OR13C4Q8NGS5 318 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 STAG3L4Q8TBR4 150 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 ANKRD49Q8WVL7 239 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 GATA6Q92908 595 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHKA-207ENST00000533728 TMA16Q96EY4 203 aaKnown RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 ALG14Q96F25 216 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 PDLIM5Q96HC4 596 aaKnown RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 ZNF570Q96NI8 536 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 CCT7Q99832 543 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 NUF2Q9BZD4 464 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 MUC3BQ9H195 1237 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 IL21Q9HBE4 155 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 S100A14Q9HCY8 104 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 PFDN4Q9NQP4 134 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 MRPL17Q9NRX2 175 aaKnown RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 POLR3BQ9NW08 1133 aaPredicted RBP9.6□□□□□ -0.87
CHKA-207ENST00000533728 SARDHQ9UL12 918 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 SRPK3Q9UPE1 567 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 LRCH1Q9Y2L9 728 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 TRAF6Q9Y4K3 522 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 KCTD3Q9Y597 815 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 PCDHB1Q9Y5F3 818 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 FBN2P35556 2912 aa9.6□□□□□ -0.87
CHKA-207ENST00000533728 CBX4O00257 560 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 STK25O00506 426 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 STX7O15400 261 aaKnown RBP9.59□□□□□ -0.87
CHKA-207ENST00000533728 MAP3K7O43318 606 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 TBL1XO60907 577 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 SRP72O76094 671 aaKnown RBP9.59□□□□□ -0.87
CHKA-207ENST00000533728 RHOBTB1O94844 696 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 ASGR2P07307 311 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 CTSAP10619 480 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 PKMP14618 531 aaKnown RBP9.59□□□□□ -0.87
CHKA-207ENST00000533728 RPS3P23396 243 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHKA-207ENST00000533728 EPHA3P29320 983 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 CTNNB1P35222 781 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 HMGCLP35914 325 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 PTGER3P43115 390 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 CACNG1Q06432 222 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 SRSF1Q07955 248 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHKA-207ENST00000533728 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 CAMK1Q14012 370 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 PTK2BQ14289 1009 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 SEMA3AQ14563 771 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 GSTA3Q16772 222 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 MUM1Q2TAK8 710 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 MPPE1Q53F39 396 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 UNC50Q53HI1 259 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 SPOUT1Q5T280 376 aaKnown RBP9.59□□□□□ -0.87
CHKA-207ENST00000533728 RETSATQ6NUM9 610 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 ZFP1Q6P2D0 407 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 BNC2Q6ZN30 1099 aaPredicted RBP9.59□□□□□ -0.87
CHKA-207ENST00000533728 CCDC149Q6ZUS6 474 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 SNX32Q86XE0 403 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 C1orf210Q8IVY1 113 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 POU5F2Q8N7G0 328 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 MDGA1Q8NFP4 955 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 RIN3Q8TB24 985 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 SPPL3Q8TCT6 385 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 TSPEARQ8WU66 669 aa9.59□□□□□ -0.87
CHKA-207ENST00000533728 MRPS31Q92665 395 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms