RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 SLC9B2Q86UD5 537 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 TSPAN33Q86UF1 283 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 FAM72BQ86X60 149 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 EPHX4Q8IUS5 362 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 CTAGE4Q8IX94 777 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 NGEFQ8N5V2 710 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 EMC1Q8N766 993 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 BBS10Q8TAM1 723 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 HM13Q8TCT9 377 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 UTP15Q8TED0 518 aaKnown RBP2.63□□□□□ -1.99
ATM-220ENST00000533526 SCRN2Q96FV2 425 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 CCDC34Q96HJ3 373 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 ABHD8Q96I13 439 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 WDFY2Q96P53 400 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 DUX3Q96PT4 197 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 NUDCD1Q96RS6 583 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 SEMA3CQ99985 751 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 POLR3GLQ9BT43 218 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 CSTL1Q9H114 145 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 LRMDAQ9H2I8 198 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 SH2D4AQ9H788 454 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 KAT14Q9H8E8 782 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 EPB41L5Q9HCM4 733 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 ZFP57Q9NU63 452 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 MTMR10Q9NXD2 777 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 TCF19Q9Y242 345 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 R3HDM2Q9Y2K5 976 aaKnown RBP2.63□□□□□ -1.99
ATM-220ENST00000533526 CLIC4Q9Y696 253 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 PIAS3Q9Y6X2 628 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 NOTCH4Q99466 2003 aa2.63□□□□□ -1.99
ATM-220ENST00000533526 IGLV5-45A0A087WSX0 123 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 MAP2K7O14733 419 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ATP2A1O14983 1001 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 SMAD9O15198 467 aaKnown RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 SYNGR3O43761 229 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ICAM1P05362 532 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 PRSS1P07477 247 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ACADMP11310 421 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 GM2AP17900 193 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 HOXA13P31271 388 aaPredicted RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 AHRP35869 848 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 CDKN1AP38936 164 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ARCN1P48444 511 aaKnown RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 CTSCP53634 463 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 SREBF2Q12772 1141 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 CDC16Q13042 620 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 DMP1Q13316 513 aaPredicted RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 KRT32Q14532 448 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 PCGF3Q3KNV8 242 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ASPRV1Q53RT3 343 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 KRTCAP3Q53RY4 240 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 LRIF1Q5T3J3 769 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 NSUN5P2Q63ZY6 315 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ACSM2BQ68CK6 577 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 OR7E24Q6IFN5 339 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 FAM171BQ6P995 826 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 KLHL35Q6PF15 583 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ZNF852Q6ZMS4 543 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 USP43Q70EL4 1123 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 SLC26A9Q7LBE3 791 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 SDCCAG8Q86SQ7 713 aaPredicted RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 TEX11Q8IYF3 940 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 GCSAMQ8N6F7 178 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 SLC38A9Q8NBW4 561 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ACVR1CQ8NER5 493 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 HMGCLL1Q8TB92 370 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 LRRC8CQ8TDW0 803 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 PPP4R1Q8TF05 950 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 SCFD2Q8WU76 684 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 USP6NLQ92738 828 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 PHF21AQ96BD5 680 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 PGAM5Q96HS1 289 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 C1orf74Q96LT6 269 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 CMTM3Q96MX0 182 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 PCYT2Q99447 389 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 POLR3CQ9BUI4 534 aaPredicted RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 C1QTNF1Q9BXJ1 281 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 TRMT1Q9NXH9 659 aaKnown RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 DBNLQ9UJU6 430 aaKnown RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 CORO1CQ9ULV4 474 aaPredicted RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 LAS1LQ9Y4W2 734 aaKnown RBP2.62□□□□□ -1.99
ATM-220ENST00000533526 SESN1Q9Y6P5 492 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 TAF1P21675 1872 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 ARHGEF40Q8TER5 1519 aa2.62□□□□□ -1.99
ATM-220ENST00000533526 PI4KAP2A4QPH2 592 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 PGPEP1LA6NFU8 196 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 EIF3DO15371 548 aaKnown RBP eCLIP2.61□□□□□ -1.99
ATM-220ENST00000533526 GRID2O43424 1007 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 HS6ST1O60243 411 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 USO1O60763 962 aaKnown RBP2.61□□□□□ -1.99
ATM-220ENST00000533526 SOCS5O75159 536 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 PDE9AO76083 593 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 CAVIN2O95810 425 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 IGHV4-39P01824 125 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 RARGP13631 454 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 PAX1P15863 534 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 PAX3P23760 479 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 NR2F2P24468 414 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 MARK3P27448 753 aa2.61□□□□□ -1.99
ATM-220ENST00000533526 PPARGP37231 505 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms