RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 INHBCP55103 352 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 B4GALNT1Q00973 533 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 KLF1Q13351 362 aaPredicted RBP16.47■□□□□ 0.23
PKP3-209ENST00000533069 LRRC69Q6ZNQ3 347 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 CHST15Q7LFX5 561 aaPredicted RBP16.47■□□□□ 0.23
PKP3-209ENST00000533069 GLT6D1Q7Z4J2 308 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 CEP112Q8N8E3 955 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 BLOC1S5Q8TDH9 187 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 FAM118BQ9BPY3 351 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 GORASP1Q9BQQ3 440 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 OR2AG1Q9H205 316 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 L2HGDHQ9H9P8 463 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 HOMER3Q9NSC5 361 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 ATXN10Q9UBB4 475 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 PKP3Q9Y446 797 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 CHD6Q8TD26 2715 aa16.47■□□□□ 0.23
PKP3-209ENST00000533069 APC2O95996 2303 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 GOLGA6L10A0A0M3HER8 536 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 CASC3O15234 703 aaKnown RBP16.46■□□□□ 0.23
PKP3-209ENST00000533069 VEGFDO43915 354 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 CEP104O60308 925 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 ACP5P13686 325 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 ZNF8P17098 575 aaPredicted RBP16.46■□□□□ 0.23
PKP3-209ENST00000533069 PSMB4P28070 264 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 SPAM1P38567 509 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 FASLGP48023 281 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 PCBP4P57723 403 aaKnown RBP16.46■□□□□ 0.23
PKP3-209ENST00000533069 DCBLD2Q96PD2 775 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 FICDQ9BVA6 458 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 FRMD8P1Q9BZ68 369 aaPredicted RBP16.46■□□□□ 0.23
PKP3-209ENST00000533069 EPB41L5Q9HCM4 733 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 BPIFA1Q9NP55 256 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 ASCL3Q9NQ33 180 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 IL17CQ9P0M4 197 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 LHX6Q9UPM6 363 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 PRKAB1Q9Y478 270 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 PCYT1BQ9Y5K3 369 aaPredicted RBP16.46■□□□□ 0.23
PKP3-209ENST00000533069 CFAP47Q6ZTR5 3102 aa16.46■□□□□ 0.23
PKP3-209ENST00000533069 GOLGA4Q13439 2230 aaKnown RBP16.46■□□□□ 0.23
PKP3-209ENST00000533069 A0A1W2PNU3 283 aaPredicted RBP16.45■□□□□ 0.22
PKP3-209ENST00000533069 C5orf60A6NFR6 353 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 CHUKO15111 745 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 CPNE6O95741 557 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 AGTP01019 485 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 ALDH4A1P30038 563 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 ADRA1AP35348 466 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 ABCG1P45844 678 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 CLCNKAP51800 687 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 MAP9Q49MG5 647 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 RANBP10Q6VN20 620 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 ZNF572Q7Z3I7 529 aaPredicted RBP16.45■□□□□ 0.22
PKP3-209ENST00000533069 B3GNT8Q7Z7M8 397 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 ADGRG6Q86SQ4 1221 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 CREG2Q8IUH2 290 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 SFRP1Q8N474 314 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 AVL9Q8NBF6 648 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 ZNF248Q8NDW4 579 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 CCDC110Q8TBZ0 833 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 SLC37A2Q8TED4 501 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 PATE1Q8WXA2 126 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 TMEM159Q96B96 161 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 SLC46A1Q96NT5 459 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 ZCCHC2Q9C0B9 1178 aaKnown RBP16.45■□□□□ 0.22
PKP3-209ENST00000533069 STN1Q9H668 368 aaKnown RBP16.45■□□□□ 0.22
PKP3-209ENST00000533069 IL26Q9NPH9 171 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 FEZ2Q9UHY8 353 aaPredicted RBP16.45■□□□□ 0.22
PKP3-209ENST00000533069 KCNK6Q9Y257 313 aa16.45■□□□□ 0.22
PKP3-209ENST00000533069 COL27A1Q8IZC6 1860 aaPredicted RBP16.44■□□□□ 0.22
PKP3-209ENST00000533069 GLYATL1P3A0A0U1RQE8 302 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 OR5K4A6NMS3 321 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 C2orf81A6NN90 581 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 CCDC188H7C350 402 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 PLD2O14939 933 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 KMOO15229 486 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 ITGA2BP08514 1039 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 CXCR5P32302 372 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 OR1D5P58170 312 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 PDE1BQ01064 536 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 ZFP36L1Q07352 338 aaKnown RBP16.44■□□□□ 0.22
PKP3-209ENST00000533069 ITGA9Q13797 1035 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 GTF2H3Q13889 308 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 TAF1AQ15573 450 aaPredicted RBP16.44■□□□□ 0.22
PKP3-209ENST00000533069 P3H1Q32P28 736 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 ATP13A5Q4VNC0 1218 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 C19orf48Q6RUI8 117 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 ARHGEF18Q6ZSZ5 1173 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 PIM3Q86V86 326 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 LRRTM4Q86VH4 590 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 SLC13A5Q86YT5 568 aaPredicted RBP16.44■□□□□ 0.22
PKP3-209ENST00000533069 KLHDC8BQ8IXV7 354 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 SLC35B2Q8TB61 432 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 BRSK1Q8TDC3 778 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 HNRNPLLQ8WVV9 542 aaKnown RBP16.44■□□□□ 0.22
PKP3-209ENST00000533069 PRR11Q96HE9 360 aaPredicted RBP16.44■□□□□ 0.22
PKP3-209ENST00000533069 DPYSL5Q9BPU6 564 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 TIMM29Q9BSF4 260 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 FOXP3Q9BZS1 431 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 ARFGAP3Q9NP61 516 aa16.44■□□□□ 0.22
PKP3-209ENST00000533069 SARS2Q9NP81 518 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms