RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CORO1CQ9ULV4 474 aaPredicted RBP14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 GMPPBQ9Y5P6 360 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 CSKP41240 450 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 RHAGQ02094 409 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 FASTKD3Q14CZ7 662 aaKnown RBP14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 TMPRSS11BQ86T26 416 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 ZNF567Q8N184 647 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 MCMBPQ9BTE3 642 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 PNPOQ9NVS9 261 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 ABI3Q9P2A4 366 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC31A1O15431 190 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 EPHA3P29320 983 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 ALKBH2Q6NS38 261 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 SPESP1Q6UW49 350 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 TMC8Q8IU68 726 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 OR10H5Q8NGA6 315 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 PRKAB1Q9Y478 270 aa14.69□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC22A3O75751 556 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 TOP3BO95985 862 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 AKT2P31751 481 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 GNPDA1P46926 289 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 UXS1Q8NBZ7 420 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 OR4A15Q8NGL6 344 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 CYB5D2Q8WUJ1 264 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 PYDC1Q8WXC3 89 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 ZNF354BQ96LW1 612 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 MIOSQ9NXC5 875 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SALL4Q9UJQ4 1053 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 IKZF3Q9UKT9 509 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 ERGIC3Q9Y282 383 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 IPO13O94829 963 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 TRBC1P01850 177 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 VARSP26640 1264 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 APLP1P51693 650 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 CCNYL2Q5T2Q4 361 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 ANKRD22Q5VYY1 191 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 IKBIPQ70UQ0 350 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 DAW1Q8N136 415 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 MAGEE2Q8TD90 523 aaPredicted RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 DDX18Q9NVP1 670 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 RNF186Q9NXI6 227 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 FBXW11Q9UKB1 542 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 C2orf71A6NGG8 1288 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 BBIP1A8MTZ0 92 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 TFPIP10646 304 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 GNSP15586 552 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 CTU1Q7Z7A3 348 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 CPNE8Q86YQ8 564 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SIAH1Q8IUQ4 282 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 EEF1AKMT1Q8WVE0 214 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 QKIQ96PU8 341 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 ARHGAP39Q9C0H5 1083 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 C12orf65Q9H3J6 166 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 LRRC4CQ9HCJ2 640 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC45A1Q9Y2W3 748 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 TRAF6Q9Y4K3 522 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 MYH2Q9UKX2 1941 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 FPGTO14772 594 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC35G6P0C7Q6 338 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 CACNA2D1P54289 1103 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 PPM1JQ5JR12 505 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SPATA19Q7Z5L4 167 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SH3RF2Q8TEC5 729 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC9A7Q96T83 725 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 NUAK2Q9H093 628 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 PNPLA8Q9NP80 782 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SPEF2Q9C093 1822 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SRRM3A6NNA2 597 aaPredicted RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 DHX15O43143 795 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 NMBRP28336 390 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 C2orf27AQ580R0 203 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 SYPL2Q5VXT5 272 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 VITQ6UXI7 678 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 GRIP2Q9C0E4 1043 aa14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 ZNF624Q9P2J8 865 aaPredicted RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 PHRF1Q9P1Y6 1649 aaKnown RBP14.68□□□□□ -0.06
PCDHA9-202ENST00000532602 ZNF460Q14592 562 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 SLC44A4Q53GD3 710 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 CNKSR3Q6P9H4 555 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 TBATAQ96M53 351 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 C5orf34Q96MH7 638 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 CCDC177Q9NQR7 707 aaPredicted RBP14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 MRPL39Q9NYK5 338 aaKnown RBP14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 INSIG1O15503 277 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 PRAMEF1O95521 474 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 SNAI1O95863 264 aaPredicted RBP14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 MASP1P48740 699 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 IL10RBQ08334 325 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 SPIRE1Q08AE8 756 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 ARHGAP36Q6ZRI8 547 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 NRSN1Q8IZ57 195 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 LCN9Q8WX39 176 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 AZIN2Q96A70 460 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 SMG9Q9H0W8 520 aaKnown RBP14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 DPEP2Q9H4A9 486 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 CCSER2Q9H7U1 834 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 NUDT4Q9NZJ9 180 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 SAMHD1Q9Y3Z3 626 aaKnown RBP14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 ARL5AQ9Y689 179 aa14.67□□□□□ -0.06
PCDHA9-202ENST00000532602 NID2Q14112 1375 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms