RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 GPX6P59796 221 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 TMPRSS15P98073 1019 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 MGAT5Q09328 741 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 TCF15Q12870 199 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 SRSF5Q13243 272 aaKnown RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 THOC5Q13769 683 aaKnown RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 STAT4Q14765 748 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 TYSND1Q2T9J0 566 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 FAM153CQ494X1 144 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 ATP13A5Q4VNC0 1218 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 LDLRAP1Q5SW96 308 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 RNF187Q5TA31 235 aaPredicted RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 ALS2CLQ60I27 953 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 NEPROQ6NW34 567 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 CES3Q6UWW8 571 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 C3orf62Q6ZUJ4 267 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 KCNMB4Q86W47 210 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 PHYKPLQ8IUZ5 450 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 MREGQ8N565 214 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 DDHD1Q8NEL9 900 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 OR6P1Q8NGX9 317 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 HNRNPLLQ8WVV9 542 aaKnown RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 CDKL2Q92772 493 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 KLK6Q92876 244 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 GLYATL1Q969I3 302 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 SKA1Q96BD8 255 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 CFAP36Q96G28 342 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 HIC2Q96JB3 615 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 BMFQ96LC9 184 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 WDR26Q9H7D7 661 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 PHPT1Q9NRX4 125 aaPredicted RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 CATSPERZQ9NTU4 200 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 C20orf96Q9NUD7 363 aaPredicted RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 INTS10Q9NVR2 710 aaKnown RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 EIF2B4Q9UI10 523 aaKnown RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 CNOT6Q9ULM6 557 aaKnown RBP12.4□□□□□ -0.42
COPB1-208ENST00000532088 PCDHGA5Q9Y5G8 931 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 HRH3Q9Y5N1 445 aa12.4□□□□□ -0.42
COPB1-208ENST00000532088 IGLV3-16A0A075B6K0 115 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 A0A1B0GTW7 788 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 A0A1W2PR77 199 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 TCRBV9S1A1TA0A576 114 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 CACNB4O00305 520 aaPredicted RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 CD3EAPO15446 510 aaKnown RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 VEGFDO43915 354 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 MYCLP1P12525 358 aaPredicted RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 GNSP15586 552 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 ACRV1P26436 265 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 SSTR1P30872 391 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 PTGER3P43115 390 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 TTPAP49638 278 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 ADARP55265 1226 aaKnown RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 CDK3Q00526 305 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 PTK2BQ14289 1009 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 INPP5AQ14642 412 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 KYNUQ16719 465 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 ZRANB3Q5FWF4 1079 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 PACS1Q6VY07 963 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 SDCCAG8Q86SQ7 713 aaPredicted RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 SLC26A11Q86WA9 606 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 CILP2Q8IUL8 1156 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 GSPT2Q8IYD1 628 aaKnown RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 NXPE1Q8N323 547 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 PLA2G15Q8NCC3 412 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 PRSS33Q8NF86 280 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 CEP76Q8TAP6 659 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 SNX19Q92543 992 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 INSM2Q96T92 566 aaPredicted RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 AGAP2Q99490 1192 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 APOOQ9BUR5 198 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 ZCCHC2Q9C0B9 1178 aaKnown RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 RMI1Q9H9A7 625 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 TM9SF3Q9HD45 589 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 FZD3Q9NPG1 666 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 ZDHHC3Q9NYG2 299 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 VPS18Q9P253 973 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 CRLS1Q9UJA2 301 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 PILRBQ9UKJ0 227 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 TNRC6BQ9UPQ9 1833 aaKnown RBP12.39□□□□□ -0.43
COPB1-208ENST00000532088 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
COPB1-208ENST00000532088 A0A087WUV0 522 aaPredicted RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 CCDC78A2IDD5 438 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 POM121BA6NF01 834 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 FAM159BA6NKW6 160 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 F8W8V4 182 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 K7ESM1 405 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 QSOX1O00391 747 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 CCL22O00626 93 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 TNFRSF10CO14798 259 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 VILLO15195 856 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 BCAT2O15382 392 aaPredicted RBP12.38□□□□□ -0.43
COPB1-208ENST00000532088 RIPK2O43353 540 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 EPN2O95208 641 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 C1QAP02745 245 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 RALBP11234 206 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 HTR1BP28222 390 aa12.38□□□□□ -0.43
COPB1-208ENST00000532088 CD38P28907 300 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms