RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 KRT14P02533 472 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 PSMA3P25788 255 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 ACTR1BP42025 376 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 ACTR1AP61163 376 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 BASP1P80723 227 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 TMPRSS15P98073 1019 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 INSM1Q01101 510 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 SEPT6Q14141 434 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 HLTFQ14527 1009 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 TRIP13Q15645 432 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 KCTD19Q17RG1 926 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 C14orf28Q4W4Y0 310 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 PERM1Q5SV97 790 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 LDLRAP1Q5SW96 308 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 CERCAMQ5T4B2 595 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 GPRC6AQ5T6X5 926 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 CCNI2Q6ZMN8 369 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 SFTPA2Q8IWL1 248 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 DDHD1Q8NEL9 900 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 GDAP1Q8TB36 358 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 STYXQ8WUJ0 223 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 DNAJC1Q96KC8 554 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 ASB8Q9H765 288 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 SMOXQ9NWM0 555 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 SAR1BQ9Y6B6 198 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 BPTFQ12830 3046 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 MYLKQ15746 1914 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 RP1P56715 2156 aa12.52□□□□□ -0.41
CCDC90B-216ENST00000529856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 CTAGE9A4FU28 777 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 H7C0S8 307 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 CCL22O00626 93 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 KMOO15229 486 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 PHF2O75151 1096 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 ACP5P13686 325 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 JUPP14923 745 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 GLB1P16278 677 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 ADRA1DP25100 572 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 FNTAP49354 379 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 CLCNKAP51800 687 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 CLDN6P56747 220 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 CDK16Q00536 496 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 NFATC2Q13469 925 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 LAMB3Q13751 1172 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 SKIDA1Q1XH10 827 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 HES3Q5TGS1 186 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 CDCP2Q5VXM1 449 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 SNX20Q7Z614 316 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 LRRTM4Q86VH4 590 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 CREG2Q8IUH2 290 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 ZNF547Q8IVP9 402 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 NAGSQ8N159 534 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 C17orf53Q8N3J3 647 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 RASGEF1AQ8N9B8 481 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 MAPK15Q8TD08 544 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 CDKN2AIPNLQ96HQ2 116 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 TTC25Q96NG3 672 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 RANBP9Q96S59 729 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 ZCCHC2Q9C0B9 1178 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 ABCG4Q9H172 646 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 KCNK6Q9Y257 313 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 KNTC1P50748 2209 aa12.51□□□□□ -0.41
CCDC90B-216ENST00000529856 HEATR9A2RTY3 570 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 FAM149AA5PLN7 773 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 AP3B1O00203 1094 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 FANCGO15287 622 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 ECEL1O95672 775 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 MT-CO3P00414 261 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 PNLIPP16233 465 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 ZNF7P17097 686 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 TPSB2P20231 275 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 ITGALP20701 1170 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 MC4RP32245 332 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 MAGEA6P43360 314 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 VPS41P49754 854 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 GPS1Q13098 491 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 GTF2H3Q13889 308 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 KCNJ11Q14654 390 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 TPSAB1Q15661 275 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 GPR33Q49SQ1 333 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 CCDC38Q502W7 563 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 TSTD2Q5T7W7 516 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 CRTC3Q6UUV7 619 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 MARCH9Q86YJ5 346 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 ARL14Q8N4G2 192 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 GRK7Q8WTQ7 553 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 CCDC74AQ96AQ1 378 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 CAPZA3Q96KX2 299 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 CCDC3Q9BQI4 270 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 TIMM29Q9BSF4 260 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 FAM96AQ9H5X1 160 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 KLC4Q9NSK0 619 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 LRIT1Q9P2V4 623 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 TBC1D29Q9UFV1 150 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 SLC23A2Q9UGH3 650 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 CRLS1Q9UJA2 301 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 RIMKLBQ9ULI2 386 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms