RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PPM1DO15297 605 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 PRLP01236 227 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 CEACAM5P06731 702 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 IVLP07476 585 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 ZFXP17010 805 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 GJC1P36383 396 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 ETV3P41162 512 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 EPHB1P54762 984 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 HADHBP55084 474 aaKnown RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 CDK3Q00526 305 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 DSC2Q02487 901 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 GBE1Q04446 702 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 MAP7Q14244 749 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 IHHQ14623 411 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SNAP47Q5SQN1 464 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 ZFYVE27Q5T4F4 411 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SLC9A4Q6AI14 798 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SLC30A9Q6PML9 568 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SARM1Q6SZW1 724 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 TIPARPQ7Z3E1 657 aaKnown RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 TSPAN33Q86UF1 283 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 NRROSQ86YC3 692 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 TICAM1Q8IUC6 712 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 CCNYQ8ND76 341 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SCARF2Q96GP6 870 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 ZNF830Q96NB3 372 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SLC38A3Q99624 504 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 ANP32EQ9BTT0 268 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 TDRD1Q9BXT4 1180 aaKnown RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 FRMD8Q9BZ67 464 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 BRD8Q9H0E9 1235 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 CASS4Q9NQ75 786 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SPTLC3Q9NUV7 552 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 DDX56Q9NY93 547 aaKnown RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 TMEM9Q9P0T7 183 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 PDP2Q9P2J9 529 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 TLK1Q9UKI8 766 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SLC17A4Q9Y2C5 497 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 CSMD1Q96PZ7 3565 aa10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SETD2Q9BYW2 2564 aaPredicted RBP10.43□□□□□ -0.74
CPSF1-203ENST00000527916 SHANK1Q9Y566 2161 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 LRRD1A4D1F6 860 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 RGSL1A5PLK6 1076 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 A8MU76 341 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 POLR1CO15160 346 aaPredicted RBP10.42□□□□□ -0.74
CPSF1-203ENST00000527916 MAP3K6O95382 1288 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 FUCA1P04066 466 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 HLA-DQB2P05538 268 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 CTPS1P17812 591 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 AK4P27144 223 aaPredicted RBP10.42□□□□□ -0.74
CPSF1-203ENST00000527916 DLSTP36957 453 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 GNPDA1P46926 289 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 STC1P52823 247 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 PMS2P54278 862 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 IFI35P80217 286 aaPredicted RBP10.42□□□□□ -0.74
CPSF1-203ENST00000527916 NIPAL4Q0D2K0 466 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 ERV3-1Q14264 604 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 PTPRRQ15256 657 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 LRRC66Q68CR7 880 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 DENND2CQ68D51 928 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 WDR74Q6RFH5 385 aaPredicted RBP10.42□□□□□ -0.74
CPSF1-203ENST00000527916 ADAMTSL4Q6UY14 1074 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 BZW1Q7L1Q6 419 aaKnown RBP10.42□□□□□ -0.74
CPSF1-203ENST00000527916 RHOT1Q8IXI2 618 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 NAGSQ8N159 534 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 PLD5Q8N7P1 536 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 CNTD1Q8N815 330 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 EXD1Q8NHP7 514 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 PATE1Q8WXA2 126 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 MAK16Q9BXY0 300 aaKnown RBP10.42□□□□□ -0.74
CPSF1-203ENST00000527916 SLC29A3Q9BZD2 475 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 ABCG8Q9H221 673 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 PCDH9Q9HC56 1237 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 KCND3Q9UK17 655 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 CHKBQ9Y259 395 aa10.42□□□□□ -0.74
CPSF1-203ENST00000527916 ANKRD66B4E2M5 251 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 APOL1O14791 398 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 LCA5LO95447 670 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 DLGAP3O95886 979 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 SOD1P00441 154 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 JCHAINP01591 159 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 MMP2P08253 660 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 VARSP26640 1264 aaKnown RBP10.41□□□□□ -0.74
CPSF1-203ENST00000527916 COL8A1P27658 744 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 GPR1P46091 355 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 FASLGP48023 281 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 NR2C2P49116 596 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 CTBSQ01459 385 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 PDK1Q15118 436 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 SLC14A2Q15849 920 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 TAZQ16635 292 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 RAET1GQ6H3X3 334 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 ARHGAP22Q7Z5H3 698 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 CCDC170Q8IYT3 715 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 RNF214Q8ND24 703 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.41□□□□□ -0.74
CPSF1-203ENST00000527916 AP2M1Q96CW1 435 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 COX14Q96I36 57 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 OLFM3Q96PB7 478 aa10.41□□□□□ -0.74
CPSF1-203ENST00000527916 MLPHQ9BV36 600 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms