RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 NTN3O00634 580 aaPredicted RBP20.88■□□□□ 0.93
PKP3-205ENST00000527442 PPFIA2O75334 1257 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 PMPCBO75439 489 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 EPOP01588 193 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 ANXA6P08133 673 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 CELA2BP08218 269 aaPredicted RBP20.88■□□□□ 0.93
PKP3-205ENST00000527442 CA4P22748 312 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 MAGEA3P43357 314 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 CSRP3P50461 194 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 RAD51Q06609 339 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 SRSF6Q13247 344 aaKnown RBP20.88■□□□□ 0.93
PKP3-205ENST00000527442 MYLK3Q32MK0 819 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 SERPINB12Q96P63 405 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 TRIB3Q96RU7 358 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 TBL1YQ9BQ87 522 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 FSD1LQ9BXM9 530 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 CASS4Q9NQ75 786 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 HECAQ9UBI9 543 aaPredicted RBP20.88■□□□□ 0.93
PKP3-205ENST00000527442 RABGEF1Q9UJ41 708 aa20.88■□□□□ 0.93
PKP3-205ENST00000527442 HEMK1Q9Y5R4 338 aaPredicted RBP20.88■□□□□ 0.93
PKP3-205ENST00000527442 LOC285095A0A1B0GVY8 99 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 NEMP1O14524 444 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 PLD2O14939 933 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 YY2O15391 372 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 POP4O95707 220 aaKnown RBP20.87■□□□□ 0.93
PKP3-205ENST00000527442 TSHRP16473 764 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 SLC5A2P31639 672 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 NFKB2Q00653 900 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 TRAF2Q12933 501 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 TGIF1Q15583 401 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 LRRC8BQ6P9F7 803 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 RANBP10Q6VN20 620 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 GSPT2Q8IYD1 628 aaKnown RBP20.87■□□□□ 0.93
PKP3-205ENST00000527442 SPOCK2Q92563 424 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 RAB7BQ96AH8 199 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 CENPTQ96BT3 561 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 TBATAQ96M53 351 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 FICDQ9BVA6 458 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 FAM117AQ9C073 453 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 ATP13A3Q9H7F0 1226 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 ARNT2Q9HBZ2 717 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 AHCTF1Q8WYP5 2266 aa20.87■□□□□ 0.93
PKP3-205ENST00000527442 E7ESA3 106 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 AP3B1O00203 1094 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 EIF3HO15372 352 aaKnown RBP eCLIP20.86■□□□□ 0.93
PKP3-205ENST00000527442 HTRA2O43464 458 aaPredicted RBP20.86■□□□□ 0.93
PKP3-205ENST00000527442 FZD6O60353 706 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 NOBOXO60393 691 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 HLA-DPA1P20036 260 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 SERPINA4P29622 427 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 CDK18Q07002 472 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 PTK2BQ14289 1009 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 SPARCL1Q14515 664 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 BRD3Q15059 726 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 PCSK7Q16549 785 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 HIF1AQ16665 826 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 ZNF805Q5CZA5 627 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 LRRC73Q5JTD7 316 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 CEP128Q6ZU80 1094 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 CAND1Q86VP6 1230 aaKnown RBP20.86■□□□□ 0.93
PKP3-205ENST00000527442 RYBPQ8N488 228 aaPredicted RBP20.86■□□□□ 0.93
PKP3-205ENST00000527442 KYQ8NBH2 561 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 OSBPL1AQ9BXW6 950 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 SLC13A1Q9BZW2 595 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 TSPYL1Q9H0U9 437 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 IL17BQ9UHF5 180 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 PCDHGA7Q9Y5G6 932 aa20.86■□□□□ 0.93
PKP3-205ENST00000527442 TLN1Q9Y490 2541 aaKnown RBP20.85■□□□□ 0.93
PKP3-205ENST00000527442 CCDC151A5D8V7 595 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 GOLGA8MH3BSY2 632 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 TRAFD1O14545 582 aaPredicted RBP20.85■□□□□ 0.93
PKP3-205ENST00000527442 NDST3O95803 873 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 FGF1P05230 155 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 HGFP14210 728 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 UGT1A5P35504 534 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 GRIA1P42261 906 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 ARL4CP56559 192 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 BCL2L1Q07817 233 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 CDH17Q12864 832 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 OLIG2Q13516 323 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 ESRP1Q6NXG1 681 aaKnown RBP20.85■□□□□ 0.93
PKP3-205ENST00000527442 MACC1Q6ZN28 852 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 USP53Q70EK8 1073 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 RAB11FIP2Q7L804 512 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 PDIK1LQ8N165 341 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 FBXO39Q8N4B4 442 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 AENQ8WTP8 325 aaKnown RBP20.85■□□□□ 0.93
PKP3-205ENST00000527442 EXTL1Q92935 676 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 CCDC74AQ96AQ1 378 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 ECHDC3Q96DC8 303 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 ZNF641Q96N77 438 aaPredicted RBP20.85■□□□□ 0.93
PKP3-205ENST00000527442 MBNL1Q9NR56 388 aaKnown RBP20.85■□□□□ 0.93
PKP3-205ENST00000527442 SIRPGQ9P1W8 387 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 GULP1Q9UBP9 304 aa20.85■□□□□ 0.93
PKP3-205ENST00000527442 A0A1W2PQ67 120 aa20.84■□□□□ 0.93
PKP3-205ENST00000527442 TSPAN11A1L157 253 aa20.84■□□□□ 0.93
PKP3-205ENST00000527442 D6RAR5 112 aa20.84■□□□□ 0.93
PKP3-205ENST00000527442 TERTO14746 1132 aaKnown RBP20.84■□□□□ 0.93
PKP3-205ENST00000527442 AREL1O15033 823 aa20.84■□□□□ 0.93
PKP3-205ENST00000527442 PGLSO95336 258 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms