RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 BLIDQ8IZY5 108 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RBFAQ8N0V3 343 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 LRRC47Q8N1G4 583 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 LIX1Q8N485 282 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 TMEM199Q8N511 208 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CELF2-AS1Q8N7Q2 184 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CNTD1Q8N815 330 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 FAM71DQ8N9W8 422 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 KDM1BQ8NB78 822 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 TP53I13Q8NBR0 393 aaPredicted RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 IL17REQ8NFR9 667 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 OR13H1Q8NG92 308 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 OR4M2Q8NGB6 313 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 OR6S1Q8NH40 331 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PHOSPHO2Q8TCD6 241 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SETD7Q8WTS6 366 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 CYGBQ8WWM9 190 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SLC13A3Q8WWT9 602 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 LARP4BQ92615 738 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 RPL3LQ92901 407 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 LPPQ93052 612 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ATP6V1E2Q96A05 226 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 AP2M1Q96CW1 435 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SGTBQ96EQ0 304 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CRELD1Q96HD1 420 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 VCPIP1Q96JH7 1222 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 EXOC2Q96KP1 924 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PWWP2AQ96N64 755 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PPP1R2P1Q96PQ5 205 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 QKIQ96PU8 341 aaKnown RBP eCLIP5.78□□□□□ -1.48
CD44-225ENST00000527326 AGPAT1Q99943 283 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CDADC1Q9BWV3 514 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 APOL6Q9BWW8 343 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ASPSCR1Q9BZE9 553 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ROGDIQ9GZN7 287 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RACGAP1Q9H0H5 632 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SEMA6AQ9H2E6 1030 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SPNS1Q9H2V7 528 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SAV1Q9H4B6 383 aaPredicted RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 WDR41Q9HAD4 459 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SRA1Q9HD15 236 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 SMPD3Q9NY59 655 aaPredicted RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 COA4Q9NYJ1 87 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ZNF224Q9NZL3 707 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 NYAP2Q9P242 653 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 MALT1Q9UDY8 824 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 MARCOQ9UEW3 520 aaPredicted RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 RAPGEFL1Q9UHV5 662 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 TLK1Q9UKI8 766 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 TMPRSS11EQ9UL52 423 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 EDARQ9UNE0 448 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 BTBD3Q9Y2F9 522 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 KLHL20Q9Y2M5 609 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.78□□□□□ -1.48
CD44-225ENST00000527326 NDUFAF1Q9Y375 327 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PCDHGB2Q9Y5G2 931 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 FKBP7Q9Y680 259 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CDY1Q9Y6F8 540 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SESN1Q9Y6P5 492 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ROBO3Q96MS0 1386 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 BCORQ6W2J9 1755 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 FAM205AQ6ZU69 1335 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CYP2D7A0A087X1C5 515 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 A0A0A6YYJ9 748 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 A0A1B0GTQ1 180 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 TMEM238LA0A1B0GVL6 79 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CCDC182A6NF36 153 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 MYMKA6NI61 221 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ARGFXA6NJG6 315 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 PP2D1A8MPX8 630 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ZNF99A8MXY4 864 aaPredicted RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 LINC00587B1AMM8 73 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 C9IYK1 514 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 NT5C1B-RDH14C9J2C7 533 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 E7ESA3 106 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SLCO1B7G3V0H7 640 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SOCS2O14508 198 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 AIM2O14862 343 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ENTPD3O75355 529 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 AVILO75366 819 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 PRDM1O75626 825 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 UGT2B17O75795 530 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 OR2B3O76000 313 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 RHOBTB1O94844 696 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 VAPBO95292 243 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 TDP2O95551 362 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 TSPAN12O95859 305 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CHRNA1P02708 482 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 IFNA4P05014 189 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SERPINE1P05121 402 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 IL6P05231 212 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 IFI30P13284 250 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 IL1R1P14778 569 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 GLB1P16278 677 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CKMT2P17540 419 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 GLRA2P23416 452 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 DNAJB1P25685 340 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 HLA-DMAP28067 261 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 HTR1BP28222 390 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 FMO4P31512 558 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms