RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GAGE12JA6NER3 117 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 GOLGA8JA6NMD2 632 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 K7ERI5 159 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 M0QZQ0 153 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ACKR2O00590 384 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 NPC1O15118 1278 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ASAP2O43150 1006 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 DHHO43323 396 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 KINO60870 393 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CAND2O75155 1236 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 TBCAO75347 108 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CNTN5O94779 1100 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 MBD3O95983 291 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 KLKB1P03952 638 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 KRT18P05783 430 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 MYL1P05976 194 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ADRB2P07550 413 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 FGF3P11487 239 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 MYOGP15173 224 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 GAP43P17677 238 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 GABRB3P28472 473 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 MLH1P40692 756 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PIK3CBP42338 1070 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CASP4P49662 377 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 NSUN2Q08J23 767 aaKnown RBP eCLIP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 DMP1Q13316 513 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PRPF4BQ13523 1007 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 NAB2Q15742 525 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ZSCAN23Q3MJ62 389 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 COBLL1Q53SF7 1204 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CLLU1OSQ5K130 101 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 C1orf220Q5T0J3 134 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CCDC183Q5T5S1 534 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ZNF658Q5TYW1 1059 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ATF7IP2Q5U623 682 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 KLHDC7AQ5VTJ3 777 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PARM1Q6UWI2 310 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 C16orf89Q6UX73 402 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CATSPER4Q7RTX7 472 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CCDC65Q8IXS2 484 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ZC3H3Q8IXZ2 948 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 EXOC8Q8IYI6 725 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ADSSL1Q8N142 457 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CCDC33Q8N5R6 958 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ADPRHL1Q8NDY3 354 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 SRFBP1Q8NEF9 429 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 DEPTORQ8TB45 409 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 OIT3Q8WWZ8 545 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 NEUROG1Q92886 237 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 SMARCE1Q969G3 411 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 SAAL1Q96ER3 474 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 EEF2KMTQ96G04 330 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 FAR2Q96K12 515 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 IFT74Q96LB3 600 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ZMAT2Q96NC0 199 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 SCLT1Q96NL6 688 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 GSDMAQ96QA5 445 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 ZNF347Q96SE7 839 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 JPH2Q9BR39 696 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PAAF1Q9BRP4 392 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PYM1Q9BRP8 204 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CBWD1Q9BRT8 395 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 GCOM2Q9BZD3 368 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 C2orf40Q9H1Z8 148 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CDT1Q9H211 546 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 HSD3B7Q9H2F3 369 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 AAMDCQ9H7C9 122 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 C17orf75Q9HAS0 396 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PRDM16Q9HAZ2 1276 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 SPAG4Q9NPE6 437 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 RGS18Q9NS28 235 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 TXLNGQ9NUQ3 528 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 EXOC1Q9NV70 894 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PRMT7Q9NVM4 692 aaPredicted RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 HIF1ANQ9NWT6 349 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 LARSQ9P2J5 1176 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 SEL1LQ9UBV2 794 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 RALYQ9UKM9 306 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 CA14Q9ULX7 337 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 TBX20Q9UMR3 447 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PIN4Q9Y237 131 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 HES2Q9Y543 173 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 STYXL1Q9Y6J8 313 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 NCOR1O75376 2440 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PTPRJQ12913 1337 aa3.12□□□□□ -1.91
CSDE1-208ENST00000524652 PRRC2BQ5JSZ5 2229 aaKnown RBP3.12□□□□□ -1.91
CSDE1-208ENST00000524652 DENND4AQ7Z401 1863 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 MYO15AQ9UKN7 3530 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 A0A0U1RQF3 1178 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 FOXO6A8MYZ6 492 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 M0QZ92 97 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 PTGESO14684 152 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 HNRNPDLO14979 420 aaKnown RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 KPNA5O15131 536 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 EIF3DO15371 548 aaKnown RBP eCLIP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 DDHD2O94830 711 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ERLIN2O94905 339 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 CXCL8P10145 99 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 HARSP12081 509 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms