RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 GPR89BP0CG08 455 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 PRSS56P0CW18 603 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 CDKN1CP49918 316 aaPredicted RBP11.81□□□□□ -0.52
CLN8-207ENST00000524258 CLCNKAP51800 687 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 CTSCP53634 463 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 CDK16Q00536 496 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 PDE1BQ01064 536 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 TMEM115Q12893 351 aaPredicted RBP11.81□□□□□ -0.52
CLN8-207ENST00000524258 FOXC1Q12948 553 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 NFATC2Q13469 925 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 CAMK2BQ13554 666 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 HLTFQ14527 1009 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLN8-207ENST00000524258 CCDC38Q502W7 563 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 CDCP2Q5VXM1 449 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 DHRS13Q6UX07 377 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 CAND1Q86VP6 1230 aaKnown RBP11.81□□□□□ -0.52
CLN8-207ENST00000524258 MARCH9Q86YJ5 346 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 PHYKPLQ8IUZ5 450 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 PIANPQ8IYJ0 282 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 NAGSQ8N159 534 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 ARL10Q8N8L6 244 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 RASGEF1AQ8N9B8 481 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 FAM46DQ8NEK8 389 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 STYXQ8WUJ0 223 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 PATE1Q8WXA2 126 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 SCNM1Q9BWG6 230 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 DDX47Q9H0S4 455 aaKnown RBP11.81□□□□□ -0.52
CLN8-207ENST00000524258 SUDS3Q9H7L9 328 aaPredicted RBP11.81□□□□□ -0.52
CLN8-207ENST00000524258 GULP1Q9UBP9 304 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 SLC2A6Q9UGQ3 507 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 APPL1Q9UKG1 709 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 KLK13Q9UKR3 277 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 PADI4Q9UM07 663 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 GPSM3Q9Y4H4 160 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 MYLKQ15746 1914 aa11.81□□□□□ -0.52
CLN8-207ENST00000524258 COL27A1Q8IZC6 1860 aaPredicted RBP11.8□□□□□ -0.52
CLN8-207ENST00000524258 ZNF106Q9H2Y7 1883 aaKnown RBP11.8□□□□□ -0.52
CLN8-207ENST00000524258 PLXNB3Q9ULL4 1909 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 OPA1O60313 960 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 CAPNS1P04632 268 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 ADRA1DP25100 572 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 ACTN2P35609 894 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 MAGEA3P43357 314 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 TMPRSS15P98073 1019 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 INSM1Q01101 510 aaPredicted RBP11.8□□□□□ -0.52
CLN8-207ENST00000524258 ILF3Q12906 894 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLN8-207ENST00000524258 GPS1Q13098 491 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 ITGA9Q13797 1035 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 LRP8Q14114 963 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 NR0B2Q15466 257 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 ZNF658BQ4V348 819 aaPredicted RBP11.8□□□□□ -0.52
CLN8-207ENST00000524258 TSTD2Q5T7W7 516 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 CCNI2Q6ZMN8 369 aaPredicted RBP11.8□□□□□ -0.52
CLN8-207ENST00000524258 GSTA5Q7RTV2 222 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 ZNF438Q7Z4V0 828 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 GALNT13Q8IUC8 556 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 CACTIN-AS1Q8N1I8 211 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 AGGF1Q8N302 714 aaeCLIP11.8□□□□□ -0.52
CLN8-207ENST00000524258 IFI44Q8TCB0 444 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 GSDMCQ9BYG8 508 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 NCKIPSDQ9NZQ3 722 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 TBC1D29Q9UFV1 150 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 ZNHIT2Q9UHR6 403 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 TCAF1Q9Y4C2 921 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 NEUROG3Q9Y4Z2 214 aa11.8□□□□□ -0.52
CLN8-207ENST00000524258 PTPRBP23467 1997 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 OR51F1A6NGY5 319 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 NTN3O00634 580 aaPredicted RBP11.79□□□□□ -0.52
CLN8-207ENST00000524258 TP73O15350 636 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 CDK14O94921 469 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 CDK4P11802 303 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 ZNF7P17097 686 aaPredicted RBP11.79□□□□□ -0.52
CLN8-207ENST00000524258 ARNTP27540 789 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 FOXN2P32314 431 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 HADHAP40939 763 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 ACTR1BP42025 376 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 VPS41P49754 854 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 DUSP3P51452 185 aaPredicted RBP11.79□□□□□ -0.52
CLN8-207ENST00000524258 MAZP56270 477 aaKnown RBP11.79□□□□□ -0.52
CLN8-207ENST00000524258 ACTR1AP61163 376 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 CRADDP78560 199 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 BASP1P80723 227 aaKnown RBP11.79□□□□□ -0.52
CLN8-207ENST00000524258 DAB2P98082 770 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 NR1D2Q14995 579 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 C14orf28Q4W4Y0 310 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 LDLRAP1Q5SW96 308 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 LRRC8BQ6P9F7 803 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 SLC30A9Q6PML9 568 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 PPP1R21Q6ZMI0 780 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 CHST15Q7LFX5 561 aaPredicted RBP11.79□□□□□ -0.52
CLN8-207ENST00000524258 EFL1Q7Z2Z2 1120 aaKnown RBP11.79□□□□□ -0.52
CLN8-207ENST00000524258 SNX20Q7Z614 316 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 NXPE1Q8N323 547 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 ARL14Q8N4G2 192 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 NAT8LQ8N9F0 302 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 DNAAF3Q8N9W5 541 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 MCUQ8NE86 351 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 NAT14Q8WUY8 206 aa11.79□□□□□ -0.52
CLN8-207ENST00000524258 SCG3Q8WXD2 468 aaKnown RBP11.79□□□□□ -0.52
CLN8-207ENST00000524258 GATA6Q92908 595 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms